Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:9003219-9659986

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ahnak 19 8989284 to 9076919 87635 + protein coding gene AHNAK nucleoprotein (desmoyokin)
Tssr158087 19 9003496 to 9003539 43 - TSS region transcription start site region 158087
Tssr154933 19 9003754 to 9003766 12 + TSS region transcription start site region 154933
Tssr154934 19 9003814 to 9003829 15 + TSS region transcription start site region 154934
Tssr154935 19 9003873 to 9003884 11 + TSS region transcription start site region 154935
Tssr154936 19 9004039 to 9004052 13 + TSS region transcription start site region 154936
Tssr154937 19 9004135 to 9004150 15 + TSS region transcription start site region 154937
Tssr154938 19 9004419 to 9004446 27 + TSS region transcription start site region 154938
Tssr154939 19 9005704 to 9005708 4 + TSS region transcription start site region 154939
Tssr154940 19 9005902 to 9005935 33 + TSS region transcription start site region 154940
Tssr154941 19 9005936 to 9005993 57 + TSS region transcription start site region 154941
Tssr154942 19 9006459 to 9006471 12 + TSS region transcription start site region 154942
Tssr154943 19 9006923 to 9006942 19 + TSS region transcription start site region 154943
Tssr154944 19 9010615 to 9010635 20 + TSS region transcription start site region 154944
Tssr154945 19 9010811 to 9010838 27 + TSS region transcription start site region 154945
Tssr154946 19 9013412 to 9013433 21 + TSS region transcription start site region 154946
Tssr154947 19 9015385 to 9015431 46 + TSS region transcription start site region 154947
Tssr154948 19 9015436 to 9015453 17 + TSS region transcription start site region 154948
Tssr154949 19 9015496 to 9015545 49 + TSS region transcription start site region 154949
Tssr154950 19 9015700 to 9015728 28 + TSS region transcription start site region 154950
Tssr154951 19 9017118 to 9017133 15 + TSS region transcription start site region 154951
Tssr154952 19 9017588 to 9017591 3 + TSS region transcription start site region 154952
Tssr154953 19 9017732 to 9017759 27 + TSS region transcription start site region 154953
Tssr154954 19 9018059 to 9018070 11 + TSS region transcription start site region 154954
Tssr154955 19 9018196 to 9018215 19 + TSS region transcription start site region 154955
Tssr154956 19 9018260 to 9018271 11 + TSS region transcription start site region 154956
Tssr154957 19 9018494 to 9018553 59 + TSS region transcription start site region 154957
Tssr154958 19 9018581 to 9018584 3 + TSS region transcription start site region 154958
Tssr154959 19 9018625 to 9018640 15 + TSS region transcription start site region 154959
Tssr154960 19 9023509 to 9023520 11 + TSS region transcription start site region 154960
Tssr154961 19 9060351 to 9060392 41 + TSS region transcription start site region 154961
Tssr154962 19 9075844 to 9075854 10 + TSS region transcription start site region 154962
Cpgi10591 19 9082584 to 9082804 220 CpG island CpG island 10591
Tssr154963 19 9083637 to 9083648 11 + TSS region transcription start site region 154963
Scgb1a1 19 9083642 to 9087956 4314 - protein coding gene secretoglobin, family 1A, member 1 (uteroglobin)
Tssr158088 19 9083667 to 9083702 35 - TSS region transcription start site region 158088
Tssr154964 19 9083699 to 9083704 5 + TSS region transcription start site region 154964
Tssr154965 19 9083714 to 9083721 7 + TSS region transcription start site region 154965
Tssr158089 19 9083714 to 9083723 9 - TSS region transcription start site region 158089
Tssr158090 19 9083726 to 9083743 17 - TSS region transcription start site region 158090
Tssr158091 19 9083745 to 9083750 5 - TSS region transcription start site region 158091
Tssr158092 19 9083751 to 9083776 25 - TSS region transcription start site region 158092
Tssr158093 19 9083791 to 9083800 9 - TSS region transcription start site region 158093
Tssr158094 19 9083803 to 9083813 10 - TSS region transcription start site region 158094
Tssr154966 19 9085183 to 9085204 21 + TSS region transcription start site region 154966
Tssr158095 19 9085220 to 9085339 119 - TSS region transcription start site region 158095
Tssr158096 19 9085341 to 9085350 9 - TSS region transcription start site region 158096
Tssr158097 19 9085355 to 9085408 53 - TSS region transcription start site region 158097
Tssr158098 19 9087945 to 9087962 17 - TSS region transcription start site region 158098
Gm41805 19 9099766 to 9102711 2945 + lncRNA gene predicted gene, 41805
Tssr154967 19 9102472 to 9102479 7 + TSS region transcription start site region 154967
Tssr154968 19 9102513 to 9102534 21 + TSS region transcription start site region 154968
Asrgl1 19 9111719 to 9135566 23847 - protein coding gene asparaginase like 1
Cpgi10592 19 9134684 to 9135797 1113 CpG island CpG island 10592
Tssr158099 19 9135036 to 9135051 15 - TSS region transcription start site region 158099
Tssr154969 19 9135154 to 9135160 6 + TSS region transcription start site region 154969
Tssr158100 19 9135556 to 9135602 46 - TSS region transcription start site region 158100
Tssr158101 19 9135603 to 9135635 32 - TSS region transcription start site region 158101
Tssr154970 19 9170728 to 9170729 1 + TSS region transcription start site region 154970
Gm38656 19 9185225 to 9187019 1794 - protein coding gene predicted gene, 38656
Gm6252 19 9216311 to 9216995 684 + unclassified gene predicted gene 6252
Tssr154971 19 9216338 to 9216345 7 + TSS region transcription start site region 154971
Gm24543 19 9234897 to 9234978 81 - miRNA gene predicted gene, 24543
Gm9750 19 9272142 to 9276614 4472 + lncRNA gene predicted gene 9750
Tssr154972 19 9283231 to 9283265 34 + TSS region transcription start site region 154972
Pcna-ps2 19 9283238 to 9284494 1256 + pseudogene proliferating cell nuclear antigen pseudogene 2
Tssr154973 19 9283563 to 9283607 44 + TSS region transcription start site region 154973
Gm2617 19 9323219 to 9339986 16767 - pseudogene predicted gene 2617
Stxbp3-ps 19 9557792 to 9559183 1391 - pseudogene syntaxin-binding protein 3, pseudogene
Tssr158102 19 9559204 to 9559248 44 - TSS region transcription start site region 158102
Gm29231 19 9605121 to 9614034 8913 + pseudogene predicted gene 29231
Tssr154974 19 9606814 to 9606836 22 + TSS region transcription start site region 154974
Gm6445 19 9607104 to 9608376 1272 + pseudogene predicted gene 6445