Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:8999090-11843181

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858 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
ocd 19 5758427 to 9933333 4174906 heritable phenotypic marker osteochondrodystrophy
Ahnak 19 8989284 to 9076919 87635 + protein coding gene AHNAK nucleoprotein (desmoyokin)
Tssr158083 19 8999691 to 8999737 46 - TSS region transcription start site region 158083
Tssr158084 19 9000122 to 9000148 26 - TSS region transcription start site region 158084
Tssr154923 19 9000685 to 9000699 14 + TSS region transcription start site region 154923
Tssr154924 19 9001775 to 9001806 31 + TSS region transcription start site region 154924
Tssr158085 19 9001780 to 9001802 22 - TSS region transcription start site region 158085
Tssr154925 19 9002405 to 9002417 12 + TSS region transcription start site region 154925
Tssr154926 19 9002463 to 9002509 46 + TSS region transcription start site region 154926
Tssr154927 19 9002644 to 9002657 13 + TSS region transcription start site region 154927
Tssr154928 19 9002708 to 9002732 24 + TSS region transcription start site region 154928
Tssr154929 19 9002760 to 9002791 31 + TSS region transcription start site region 154929
Tssr154930 19 9002801 to 9002837 36 + TSS region transcription start site region 154930
Tssr158086 19 9002947 to 9002967 20 - TSS region transcription start site region 158086
Tssr154931 19 9003061 to 9003101 40 + TSS region transcription start site region 154931
Tssr154932 19 9003125 to 9003136 11 + TSS region transcription start site region 154932
Tssr158087 19 9003496 to 9003539 43 - TSS region transcription start site region 158087
Tssr154933 19 9003754 to 9003766 12 + TSS region transcription start site region 154933
Tssr154934 19 9003814 to 9003829 15 + TSS region transcription start site region 154934
Tssr154935 19 9003873 to 9003884 11 + TSS region transcription start site region 154935
Tssr154936 19 9004039 to 9004052 13 + TSS region transcription start site region 154936
Tssr154937 19 9004135 to 9004150 15 + TSS region transcription start site region 154937
Tssr154938 19 9004419 to 9004446 27 + TSS region transcription start site region 154938
Tssr154939 19 9005704 to 9005708 4 + TSS region transcription start site region 154939
Tssr154940 19 9005902 to 9005935 33 + TSS region transcription start site region 154940
Tssr154941 19 9005936 to 9005993 57 + TSS region transcription start site region 154941
Tssr154942 19 9006459 to 9006471 12 + TSS region transcription start site region 154942
Tssr154943 19 9006923 to 9006942 19 + TSS region transcription start site region 154943
Tssr154944 19 9010615 to 9010635 20 + TSS region transcription start site region 154944
Tssr154945 19 9010811 to 9010838 27 + TSS region transcription start site region 154945
Tssr154946 19 9013412 to 9013433 21 + TSS region transcription start site region 154946
Tssr154947 19 9015385 to 9015431 46 + TSS region transcription start site region 154947
Tssr154948 19 9015436 to 9015453 17 + TSS region transcription start site region 154948
Tssr154949 19 9015496 to 9015545 49 + TSS region transcription start site region 154949
Tssr154950 19 9015700 to 9015728 28 + TSS region transcription start site region 154950
Tssr154951 19 9017118 to 9017133 15 + TSS region transcription start site region 154951
Tssr154952 19 9017588 to 9017591 3 + TSS region transcription start site region 154952
Tssr154953 19 9017732 to 9017759 27 + TSS region transcription start site region 154953
Tssr154954 19 9018059 to 9018070 11 + TSS region transcription start site region 154954
Tssr154955 19 9018196 to 9018215 19 + TSS region transcription start site region 154955
Tssr154956 19 9018260 to 9018271 11 + TSS region transcription start site region 154956
Tssr154957 19 9018494 to 9018553 59 + TSS region transcription start site region 154957
Tssr154958 19 9018581 to 9018584 3 + TSS region transcription start site region 154958
Tssr154959 19 9018625 to 9018640 15 + TSS region transcription start site region 154959
Tssr154960 19 9023509 to 9023520 11 + TSS region transcription start site region 154960
Tssr154961 19 9060351 to 9060392 41 + TSS region transcription start site region 154961
Tssr154962 19 9075844 to 9075854 10 + TSS region transcription start site region 154962
Cpgi10591 19 9082584 to 9082804 220 CpG island CpG island 10591
Tssr154963 19 9083637 to 9083648 11 + TSS region transcription start site region 154963
Scgb1a1 19 9083642 to 9087956 4314 - protein coding gene secretoglobin, family 1A, member 1 (uteroglobin)
Tssr158088 19 9083667 to 9083702 35 - TSS region transcription start site region 158088
Tssr154964 19 9083699 to 9083704 5 + TSS region transcription start site region 154964
Tssr158089 19 9083714 to 9083723 9 - TSS region transcription start site region 158089
Tssr154965 19 9083714 to 9083721 7 + TSS region transcription start site region 154965
Tssr158090 19 9083726 to 9083743 17 - TSS region transcription start site region 158090
Tssr158091 19 9083745 to 9083750 5 - TSS region transcription start site region 158091
Tssr158092 19 9083751 to 9083776 25 - TSS region transcription start site region 158092
Tssr158093 19 9083791 to 9083800 9 - TSS region transcription start site region 158093
Tssr158094 19 9083803 to 9083813 10 - TSS region transcription start site region 158094
Tssr154966 19 9085183 to 9085204 21 + TSS region transcription start site region 154966
Tssr158095 19 9085220 to 9085339 119 - TSS region transcription start site region 158095
Tssr158096 19 9085341 to 9085350 9 - TSS region transcription start site region 158096
Tssr158097 19 9085355 to 9085408 53 - TSS region transcription start site region 158097
Tssr158098 19 9087945 to 9087962 17 - TSS region transcription start site region 158098
Gm41805 19 9099766 to 9102711 2945 + lncRNA gene predicted gene, 41805
Tssr154967 19 9102472 to 9102479 7 + TSS region transcription start site region 154967
Tssr154968 19 9102513 to 9102534 21 + TSS region transcription start site region 154968
Asrgl1 19 9111719 to 9135566 23847 - protein coding gene asparaginase like 1
Cpgi10592 19 9134684 to 9135797 1113 CpG island CpG island 10592
Tssr158099 19 9135036 to 9135051 15 - TSS region transcription start site region 158099
Tssr154969 19 9135154 to 9135160 6 + TSS region transcription start site region 154969
Tssr158100 19 9135556 to 9135602 46 - TSS region transcription start site region 158100
Tssr158101 19 9135603 to 9135635 32 - TSS region transcription start site region 158101
Tssr154970 19 9170728 to 9170729 1 + TSS region transcription start site region 154970
Gm38656 19 9185225 to 9187019 1794 - protein coding gene predicted gene, 38656
Gm6252 19 9216311 to 9216995 684 + unclassified gene predicted gene 6252
Tssr154971 19 9216338 to 9216345 7 + TSS region transcription start site region 154971
Gm24543 19 9234897 to 9234978 81 - miRNA gene predicted gene, 24543
Gm9750 19 9272142 to 9276614 4472 + lncRNA gene predicted gene 9750
Tssr154972 19 9283231 to 9283265 34 + TSS region transcription start site region 154972
Pcna-ps2 19 9283238 to 9284494 1256 + pseudogene proliferating cell nuclear antigen pseudogene 2
Tssr154973 19 9283563 to 9283607 44 + TSS region transcription start site region 154973
Gm2617 19 9323219 to 9339986 16767 - pseudogene predicted gene 2617
Stxbp3-ps 19 9557792 to 9559183 1391 - pseudogene syntaxin-binding protein 3, pseudogene
Tssr158102 19 9559204 to 9559248 44 - TSS region transcription start site region 158102
Gm29231 19 9605121 to 9614034 8913 + pseudogene predicted gene 29231
Tssr154974 19 9606814 to 9606836 22 + TSS region transcription start site region 154974
Gm6445 19 9607104 to 9608376 1272 + pseudogene predicted gene 6445
Tssr158103 19 9744120 to 9744126 6 - TSS region transcription start site region 158103
Scgb2a2 19 9847435 to 9852046 4611 + protein coding gene secretoglobin, family 2A, member 2
Tssr154975 19 9847556 to 9847560 4 + TSS region transcription start site region 154975
Gm22369 19 9855319 to 9855422 103 + miRNA gene predicted gene, 22369
Incenp 19 9872297 to 9899533 27236 - protein coding gene inner centromere protein
Gm19054 19 9888477 to 9889169 692 + pseudogene predicted gene, 19054
Tssr158104 19 9891119 to 9891122 3 - TSS region transcription start site region 158104
Tssr158105 19 9895944 to 9895962 18 - TSS region transcription start site region 158105
Cpgi10593 19 9898910 to 9899884 974 CpG island CpG island 10593
Tssr158106 19 9899390 to 9899401 11 - TSS region transcription start site region 158106
Tssr158107 19 9899427 to 9899439 12 - TSS region transcription start site region 158107
Tssr158108 19 9899450 to 9899501 51 - TSS region transcription start site region 158108
Tssr154976 19 9899643 to 9899652 9 + TSS region transcription start site region 154976
Tssr154977 19 9899669 to 9899692 23 + TSS region transcription start site region 154977
Tssr154978 19 9899700 to 9899722 22 + TSS region transcription start site region 154978
Tssr154979 19 9899723 to 9899738 15 + TSS region transcription start site region 154979
Tssr154980 19 9899947 to 9899977 30 + TSS region transcription start site region 154980
Tssr158109 19 9905861 to 9905876 15 - TSS region transcription start site region 158109
Gm24484 19 9908158 to 9908278 120 + miRNA gene predicted gene, 24484
Tssr158110 19 9914150 to 9914168 18 - TSS region transcription start site region 158110
Tssr158111 19 9914174 to 9914209 35 - TSS region transcription start site region 158111
Tssr154981 19 9914551 to 9914562 11 + TSS region transcription start site region 154981
Tssr154982 19 9914574 to 9914591 17 + TSS region transcription start site region 154982
Gm36913 19 9924510 to 9947628 23118 - lncRNA gene predicted gene, 36913
Tssr158112 19 9928364 to 9928385 21 - TSS region transcription start site region 158112
Tssr158113 19 9931147 to 9931163 16 - TSS region transcription start site region 158113
Tssr158114 19 9931173 to 9931189 16 - TSS region transcription start site region 158114
Tssr158115 19 9931250 to 9931253 3 - TSS region transcription start site region 158115
D19Mit56 19 9933199 to 9933333 134 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 56
Tssr158116 19 9936703 to 9936731 28 - TSS region transcription start site region 158116
Tssr158117 19 9938762 to 9938808 46 - TSS region transcription start site region 158117
Cpgi10594 19 9938780 to 9938958 178 CpG island CpG island 10594
Tssr158118 19 9938834 to 9938849 15 - TSS region transcription start site region 158118
Tssr154983 19 9938914 to 9938927 13 + TSS region transcription start site region 154983
Tssr154984 19 9939175 to 9939189 14 + TSS region transcription start site region 154984
Tssr154985 19 9939253 to 9939271 18 + TSS region transcription start site region 154985
Tssr154986 19 9939279 to 9939291 12 + TSS region transcription start site region 154986
D19Dcr73 19 9943003 to 9943098 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 73
Tssr158119 19 9945864 to 9945875 11 - TSS region transcription start site region 158119
Tssr158120 19 9945892 to 9945903 11 - TSS region transcription start site region 158120
Tssr158121 19 9947987 to 9947996 9 - TSS region transcription start site region 158121
Tssr158122 19 9954198 to 9954222 24 - TSS region transcription start site region 158122
Tssr158123 19 9954473 to 9954491 18 - TSS region transcription start site region 158123
Tssr158124 19 9954504 to 9954526 22 - TSS region transcription start site region 158124
Tssr154987 19 9954683 to 9954718 35 + TSS region transcription start site region 154987
Tssr154988 19 9954753 to 9954781 28 + TSS region transcription start site region 154988
Tssr154989 19 9954842 to 9954855 13 + TSS region transcription start site region 154989
Tssr154990 19 9954872 to 9954888 16 + TSS region transcription start site region 154990
Tssr158125 19 9955033 to 9955046 13 - TSS region transcription start site region 158125
Tssr154991 19 9955086 to 9955096 10 + TSS region transcription start site region 154991
Tssr154992 19 9955134 to 9955146 12 + TSS region transcription start site region 154992
Tssr158126 19 9964630 to 9964638 8 - TSS region transcription start site region 158126
Gm41806 19 9970121 to 9971605 1484 + lncRNA gene predicted gene, 41806
Tssr158127 19 9974862 to 9974868 6 - TSS region transcription start site region 158127
Tssr154993 19 9975172 to 9975202 30 + TSS region transcription start site region 154993
Tssr158128 19 9977745 to 9977752 7 - TSS region transcription start site region 158128
Tssr154994 19 9977999 to 9978038 39 + TSS region transcription start site region 154994
Tssr158129 19 9978424 to 9978431 7 - TSS region transcription start site region 158129
Tssr158130 19 9978461 to 9978502 41 - TSS region transcription start site region 158130
Tssr154995 19 9978790 to 9978803 13 + TSS region transcription start site region 154995
Tssr154996 19 9978926 to 9978957 31 + TSS region transcription start site region 154996
Tssr154997 19 9980546 to 9980564 18 + TSS region transcription start site region 154997
Tssr154998 19 9980576 to 9980606 30 + TSS region transcription start site region 154998
Tssr154999 19 9980639 to 9980650 11 + TSS region transcription start site region 154999
Tssr155000 19 9980682 to 9980697 15 + TSS region transcription start site region 155000
Tssr155001 19 9980707 to 9980716 9 + TSS region transcription start site region 155001
Tssr155002 19 9980858 to 9980867 9 + TSS region transcription start site region 155002
Cpgi10595 19 9982047 to 9983385 1338 CpG island CpG island 10595
Tssr158131 19 9982425 to 9982435 10 - TSS region transcription start site region 158131
Tssr158132 19 9982441 to 9982449 8 - TSS region transcription start site region 158132
Tssr158133 19 9982484 to 9982506 22 - TSS region transcription start site region 158133
Tssr158134 19 9982512 to 9982531 19 - TSS region transcription start site region 158134
Tssr158135 19 9982546 to 9982567 21 - TSS region transcription start site region 158135
Tssr155003 19 9982694 to 9982711 17 + TSS region transcription start site region 155003
Fth1 19 9982703 to 9985092 2389 + protein coding gene ferritin heavy polypeptide 1
Tssr155004 19 9982848 to 9982852 4 + TSS region transcription start site region 155004
Tssr158136 19 9982891 to 9982940 49 - TSS region transcription start site region 158136
Tssr155005 19 9983088 to 9983118 30 + TSS region transcription start site region 155005
Tssr155006 19 9984178 to 9984219 41 + TSS region transcription start site region 155006
Tssr158137 19 9984219 to 9984237 18 - TSS region transcription start site region 158137
Tssr155007 19 9984247 to 9984292 45 + TSS region transcription start site region 155007
Tssr158138 19 9984265 to 9984326 61 - TSS region transcription start site region 158138
Tssr155008 19 9984557 to 9984583 26 + TSS region transcription start site region 155008
Tssr158139 19 9984585 to 9984619 34 - TSS region transcription start site region 158139
Tssr158140 19 9984806 to 9984840 34 - TSS region transcription start site region 158140
Tssr158141 19 9984857 to 9984868 11 - TSS region transcription start site region 158141
Tssr158142 19 9984873 to 9984893 20 - TSS region transcription start site region 158142
Tssr155009 19 9984903 to 9984929 26 + TSS region transcription start site region 155009
Tssr158143 19 9984932 to 9984959 27 - TSS region transcription start site region 158143
Tssr158144 19 9985089 to 9985097 8 - TSS region transcription start site region 158144
Tssr155010 19 9985093 to 9985117 24 + TSS region transcription start site region 155010
Tssr155011 19 9991589 to 9991590 1 + TSS region transcription start site region 155011
Cpgi10596 19 9992751 to 9993316 565 CpG island CpG island 10596
Tssr158145 19 9992956 to 9992993 37 - TSS region transcription start site region 158145
Tssr158146 19 10001561 to 10001582 21 - TSS region transcription start site region 158146
Tssr158147 19 10001585 to 10001622 37 - TSS region transcription start site region 158147
Tssr158148 19 10001625 to 10001632 7 - TSS region transcription start site region 158148
Best1 19 10001633 to 9985174 -16459 - protein coding gene bestrophin 1
Rab3il1 19 10001674 to 10038380 36706 + protein coding gene RAB3A interacting protein (rabin3)-like 1
Tssr155012 19 10001692 to 10001703 11 + TSS region transcription start site region 155012
Tssr5440 19 10001705 to 10001712 7 + TSS region transcription start site region 5440
Tssr155013 19 10001718 to 10001732 14 + TSS region transcription start site region 155013
Tssr155014 19 10015039 to 10015055 16 + TSS region transcription start site region 155014
Cpgi10597 19 10017759 to 10018616 857 CpG island CpG island 10597
Tssr155015 19 10018220 to 10018237 17 + TSS region transcription start site region 155015
Tssr155016 19 10018241 to 10018257 16 + TSS region transcription start site region 155016
Tssr155017 19 10018265 to 10018276 11 + TSS region transcription start site region 155017
Tssr155018 19 10022769 to 10022799 30 + TSS region transcription start site region 155018
Tssr155019 19 10028464 to 10028477 13 + TSS region transcription start site region 155019
Tssr155020 19 10034672 to 10034689 17 + TSS region transcription start site region 155020
Cpgi10598 19 10040911 to 10042559 1648 CpG island CpG island 10598
Fads3 19 10041548 to 10059671 18123 + protein coding gene fatty acid desaturase 3