Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:8732139-8782155

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi10569 19 8735664 to 8736291 627 CpG island CpG island 10569
Tssr154805 19 8735792 to 8735807 15 + TSS region transcription start site region 154805
Tssr154806 19 8735808 to 8735864 56 + TSS region transcription start site region 154806
Wdr74 19 8735827 to 8740624 4797 + protein coding gene WD repeat domain 74
Gm45736 19 8735841 to 8741223 5382 + protein coding gene predicted gene 45736
Tssr158048 19 8740571 to 8740579 8 - TSS region transcription start site region 158048
Tssr154807 19 8740702 to 8740707 5 + TSS region transcription start site region 154807
Tssr154808 19 8740712 to 8740723 11 + TSS region transcription start site region 154808
1700092M07Rik 19 8740718 to 8741225 507 + protein coding gene RIKEN cDNA 1700092M07 gene
Tssr154809 19 8740739 to 8740767 28 + TSS region transcription start site region 154809
Cpgi10570 19 8741032 to 8742437 1405 CpG island CpG island 10570
Tssr154810 19 8741415 to 8741461 46 + TSS region transcription start site region 154810
Stx5a 19 8741424 to 8755642 14218 + protein coding gene syntaxin 5A
Tssr154811 19 8741473 to 8741503 30 + TSS region transcription start site region 154811
Tssr154812 19 8741794 to 8741811 17 + TSS region transcription start site region 154812
Tssr154813 19 8741815 to 8741865 50 + TSS region transcription start site region 154813
Mir6992 19 8742971 to 8743079 108 + miRNA gene microRNA 6992
1700023D09Rik 19 8754789 to 8756969 2180 - lncRNA gene RIKEN cDNA 1700023D09 gene
Cpgi10571 19 8756683 to 8757585 902 CpG island CpG island 10571
Tssr154814 19 8756723 to 8756744 21 + TSS region transcription start site region 154814
Tssr158049 19 8756898 to 8756913 15 - TSS region transcription start site region 158049
Tssr154815 19 8757079 to 8757093 14 + TSS region transcription start site region 154815
Tssr154816 19 8757099 to 8757126 27 + TSS region transcription start site region 154816
Nxf1 19 8757103 to 8770910 13807 + protein coding gene nuclear RNA export factor 1
Tssr154817 19 8757139 to 8757155 16 + TSS region transcription start site region 154817
Tssr154818 19 8757414 to 8757447 33 + TSS region transcription start site region 154818
Tssr154819 19 8765030 to 8765034 4 + TSS region transcription start site region 154819
Tssr154820 19 8766714 to 8766727 13 + TSS region transcription start site region 154820
Cpgi10572 19 8770849 to 8771449 600 CpG island CpG island 10572
Tssr154821 19 8770983 to 8771019 36 + TSS region transcription start site region 154821
Tmem223 19 8770996 to 8772475 1479 + protein coding gene transmembrane protein 223
Tssr154822 19 8771037 to 8771055 18 + TSS region transcription start site region 154822
Tssr154823 19 8771058 to 8771069 11 + TSS region transcription start site region 154823
Tmem179b 19 8772522 to 8774467 1945 - protein coding gene transmembrane protein 179B
Tssr158050 19 8773567 to 8773595 28 - TSS region transcription start site region 158050
Cpgi10573 19 8774233 to 8775322 1089 CpG island CpG island 10573
Taf6l 19 8774354 to 8786417 12063 - protein coding gene TATA-box binding protein associated factor 6 like
Tssr158051 19 8774431 to 8774470 39 - TSS region transcription start site region 158051
Tssr154824 19 8774484 to 8774496 12 + TSS region transcription start site region 154824
Gm2518 19 8774485 to 8776962 2477 + pseudogene predicted gene 2518