Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:7832397-8715004

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm7096 19 7806297 to 7848669 42372 - pseudogene predicted gene 7096
Slc22a27 19 7864388 to 7966027 101639 - protein coding gene solute carrier family 22, member 27
Gm24951 19 7959530 to 7959638 108 - miRNA gene predicted gene, 24951
Gm6192 19 7959743 to 7961107 1364 - pseudogene predicted gene 6192
Tssr158006 19 7961168 to 7961170 2 - TSS region transcription start site region 158006
Tssr158007 19 7966009 to 7966037 28 - TSS region transcription start site region 158007
Tssr158008 19 7966598 to 7966601 3 - TSS region transcription start site region 158008
Gm6386 19 7975735 to 7978339 2604 + pseudogene predicted gene 6386
9530053H05Rik 19 8019554 to 8034087 14533 unclassified non-coding RNA gene RIKEN cDNA 9530053H05 gene
Slc22a28 19 8062209 to 8131982 69773 - protein coding gene solute carrier family 22, member 28
Slc22a29 19 8160165 to 8218900 58735 - protein coding gene solute carrier family 22. member 29
Tssr158009 19 8218832 to 8218849 17 - TSS region transcription start site region 158009
Gm41804 19 8251312 to 8289649 38337 + lncRNA gene predicted gene, 41804
Cpgi10563 19 8251997 to 8252704 707 CpG island CpG island 10563
Tssr158010 19 8252273 to 8252290 17 - TSS region transcription start site region 158010
Gm7105 19 8255938 to 8257662 1724 - pseudogene predicted gene 7105
Tssr158011 19 8257646 to 8257649 3 - TSS region transcription start site region 158011
Tssr158012 19 8262602 to 8262649 47 - TSS region transcription start site region 158012
Tssr158013 19 8263190 to 8263199 9 - TSS region transcription start site region 158013
Gm8184 19 8272397 to 8275004 2607 + pseudogene predicted gene 8184
Slc22a30 19 8335371 to 8405111 69740 - protein coding gene solute carrier family 22, member 30
Tssr158014 19 8344578 to 8344582 4 - TSS region transcription start site region 158014
Gm8189 19 8477273 to 8541800 64527 - pseudogene predicted gene 8189
Tssr158015 19 8479030 to 8479034 4 - TSS region transcription start site region 158015
Tssr158016 19 8518975 to 8518998 23 - TSS region transcription start site region 158016
Cpgi10564 19 8569626 to 8569815 189 CpG island CpG island 10564
Gm6425 19 8588407 to 8589196 789 - pseudogene predicted pseudogene 6425
Tssr154777 19 8591173 to 8591180 7 + TSS region transcription start site region 154777
Slc22a8 19 8591254 to 8611834 20580 + protein coding gene solute carrier family 22 (organic anion transporter), member 8
Tssr154778 19 8591277 to 8591300 23 + TSS region transcription start site region 154778
Tssr154779 19 8593175 to 8593192 17 + TSS region transcription start site region 154779
Tssr154780 19 8594051 to 8594069 18 + TSS region transcription start site region 154780
Tssr154781 19 8594071 to 8594127 56 + TSS region transcription start site region 154781
Tssr154782 19 8594147 to 8594154 7 + TSS region transcription start site region 154782
Gm36394 19 8611932 to 8621184 9252 - lncRNA gene predicted gene, 36394
Tssr154783 19 8617991 to 8618000 9 + TSS region transcription start site region 154783
Slc22a6 19 8617996 to 8628299 10303 + protein coding gene solute carrier family 22 (organic anion transporter), member 6
Tssr154784 19 8618005 to 8618044 39 + TSS region transcription start site region 154784
Tssr154785 19 8618046 to 8618056 10 + TSS region transcription start site region 154785
Tssr154786 19 8618133 to 8618153 20 + TSS region transcription start site region 154786
Tssr154787 19 8618160 to 8618184 24 + TSS region transcription start site region 154787
Tssr154788 19 8618189 to 8618200 11 + TSS region transcription start site region 154788
Tssr154789 19 8618325 to 8618337 12 + TSS region transcription start site region 154789
9830166K06Rik 19 8651796 to 8663335 11539 - lncRNA gene RIKEN cDNA 9830166K06 gene
Cpgi10565 19 8661878 to 8662434 556 CpG island CpG island 10565
Cpgi10566 19 8662458 to 8662654 196 CpG island CpG island 10566
Tssr158017 19 8663289 to 8663314 25 - TSS region transcription start site region 158017
Tssr158018 19 8663318 to 8663339 21 - TSS region transcription start site region 158018
Chrm1 19 8664005 to 8683606 19601 + protein coding gene cholinergic receptor, muscarinic 1, CNS
Tssr154790 19 8664046 to 8664120 74 + TSS region transcription start site region 154790
Tssr154791 19 8664306 to 8664337 31 + TSS region transcription start site region 154791
Tssr154792 19 8664339 to 8664354 15 + TSS region transcription start site region 154792
Tssr154793 19 8664366 to 8664381 15 + TSS region transcription start site region 154793
Tssr154794 19 8664383 to 8664394 11 + TSS region transcription start site region 154794
Tssr154795 19 8664395 to 8664419 24 + TSS region transcription start site region 154795
Tssr154796 19 8667759 to 8667762 3 + TSS region transcription start site region 154796
Gm22820 19 8681835 to 8682163 328 - unclassified non-coding RNA gene predicted gene, 22820
Tssr154797 19 8702825 to 8702839 14 + TSS region transcription start site region 154797
Slc3a2 19 8706882 to 8723369 16487 - protein coding gene solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
Tssr158019 19 8707793 to 8707806 13 - TSS region transcription start site region 158019
Tssr158020 19 8707841 to 8707852 11 - TSS region transcription start site region 158020
Tssr158021 19 8707860 to 8707872 12 - TSS region transcription start site region 158021
Tssr158022 19 8707879 to 8707897 18 - TSS region transcription start site region 158022
Tssr158023 19 8708018 to 8708038 20 - TSS region transcription start site region 158023
Tssr158024 19 8708044 to 8708055 11 - TSS region transcription start site region 158024
Tssr158025 19 8708299 to 8708303 4 - TSS region transcription start site region 158025
Tssr158026 19 8709068 to 8709128 60 - TSS region transcription start site region 158026
Tssr158027 19 8709256 to 8709267 11 - TSS region transcription start site region 158027
Tssr158028 19 8709381 to 8709417 36 - TSS region transcription start site region 158028
Tssr158029 19 8709577 to 8709627 50 - TSS region transcription start site region 158029
Tssr158030 19 8709740 to 8709785 45 - TSS region transcription start site region 158030
Tssr158031 19 8711866 to 8711892 26 - TSS region transcription start site region 158031
Tssr158032 19 8712035 to 8712040 5 - TSS region transcription start site region 158032
Tssr154798 19 8712221 to 8712234 13 + TSS region transcription start site region 154798
Tssr158033 19 8712888 to 8712952 64 - TSS region transcription start site region 158033
Tssr158034 19 8712967 to 8713023 56 - TSS region transcription start site region 158034
Cpgi10567 19 8713251 to 8714005 754 CpG island CpG island 10567
Tssr158035 19 8713362 to 8713404 42 - TSS region transcription start site region 158035
Tssr158036 19 8713862 to 8713881 19 - TSS region transcription start site region 158036
Tssr158037 19 8713886 to 8713893 7 - TSS region transcription start site region 158037
Tssr158038 19 8714200 to 8714207 7 - TSS region transcription start site region 158038
Tssr158039 19 8714304 to 8714316 12 - TSS region transcription start site region 158039
Tssr158040 19 8714326 to 8714336 10 - TSS region transcription start site region 158040
Tssr158041 19 8714363 to 8714364 1 - TSS region transcription start site region 158041
Tssr158042 19 8714394 to 8714414 20 - TSS region transcription start site region 158042
Tssr158043 19 8714440 to 8714450 10 - TSS region transcription start site region 158043