Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:7582209-8611982

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plaat3 19 7557459 to 7588545 31086 + protein coding gene phospholipase A and acyltransferase 3
Tssr157992 19 7583230 to 7583251 21 - TSS region transcription start site region 157992
Tssr157993 19 7583265 to 7583273 8 - TSS region transcription start site region 157993
Tssr157994 19 7583332 to 7583336 4 - TSS region transcription start site region 157994
D19Mit78 19 7591408 to 7591541 133 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 78
Tssr154774 19 7591806 to 7591810 4 + TSS region transcription start site region 154774
Lgals12 19 7596660 to 7607193 10533 - protein coding gene lectin, galactose binding, soluble 12
Tssr157995 19 7597969 to 7597987 18 - TSS region transcription start site region 157995
Tssr157996 19 7606954 to 7606965 11 - TSS region transcription start site region 157996
Tssr157997 19 7607140 to 7607203 63 - TSS region transcription start site region 157997
Tssr157998 19 7610465 to 7610483 18 - TSS region transcription start site region 157998
Cpgi10562 19 7612125 to 7612837 712 CpG island CpG island 10562
Tssr154775 19 7612496 to 7612507 11 + TSS region transcription start site region 154775
Tssr154776 19 7612519 to 7612618 99 + TSS region transcription start site region 154776
Plaat5 19 7612569 to 7639238 26669 + protein coding gene phospholipase A and acyltransferase 5
D19Mit44 19 7641313 to 7641425 112 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 44
Gm16437 19 7668287 to 7668793 506 + pseudogene predicted pseudogene 16437
Slc22a19 19 7673075 to 7711310 38235 - protein coding gene solute carrier family 22 (organic anion transporter), member 19
Gm15967 19 7695902 to 7697016 1114 - pseudogene predicted gene 15967
Gm15968 19 7703946 to 7705113 1167 - pseudogene predicted gene 15968
Tssr157999 19 7711086 to 7711106 20 - TSS region transcription start site region 157999
Tssr158000 19 7711235 to 7711246 11 - TSS region transcription start site region 158000
Tssr158001 19 7711263 to 7711313 50 - TSS region transcription start site region 158001
Gm8157 19 7727182 to 7727673 491 - pseudogene predicted gene 8157
Gm18544 19 7729370 to 7729953 583 + pseudogene predicted gene, 18544
Slc22a26 19 7781041 to 7802667 21626 - protein coding gene solute carrier family 22 (organic cation transporter), member 26
Tssr158002 19 7802185 to 7802200 15 - TSS region transcription start site region 158002
Tssr158003 19 7802646 to 7802666 20 - TSS region transcription start site region 158003
Tssr158004 19 7802669 to 7802680 11 - TSS region transcription start site region 158004
Tssr158005 19 7802684 to 7802690 6 - TSS region transcription start site region 158005
Gm7096 19 7806297 to 7848669 42372 - pseudogene predicted gene 7096
Slc22a27 19 7864388 to 7966027 101639 - protein coding gene solute carrier family 22, member 27
Gm24951 19 7959530 to 7959638 108 - miRNA gene predicted gene, 24951
Gm6192 19 7959743 to 7961107 1364 - pseudogene predicted gene 6192
Tssr158006 19 7961168 to 7961170 2 - TSS region transcription start site region 158006
Tssr158007 19 7966009 to 7966037 28 - TSS region transcription start site region 158007
Tssr158008 19 7966598 to 7966601 3 - TSS region transcription start site region 158008
Gm6386 19 7975735 to 7978339 2604 + pseudogene predicted gene 6386
9530053H05Rik 19 8019554 to 8034087 14533 unclassified non-coding RNA gene RIKEN cDNA 9530053H05 gene
Slc22a28 19 8062209 to 8131982 69773 - protein coding gene solute carrier family 22, member 28
Slc22a29 19 8160165 to 8218900 58735 - protein coding gene solute carrier family 22. member 29
Tssr158009 19 8218832 to 8218849 17 - TSS region transcription start site region 158009
Gm41804 19 8251312 to 8289649 38337 + lncRNA gene predicted gene, 41804
Cpgi10563 19 8251997 to 8252704 707 CpG island CpG island 10563
Tssr158010 19 8252273 to 8252290 17 - TSS region transcription start site region 158010
Gm7105 19 8255938 to 8257662 1724 - pseudogene predicted gene 7105
Tssr158011 19 8257646 to 8257649 3 - TSS region transcription start site region 158011
Tssr158012 19 8262602 to 8262649 47 - TSS region transcription start site region 158012
Tssr158013 19 8263190 to 8263199 9 - TSS region transcription start site region 158013
Gm8184 19 8272397 to 8275004 2607 + pseudogene predicted gene 8184
Slc22a30 19 8335371 to 8405111 69740 - protein coding gene solute carrier family 22, member 30
Tssr158014 19 8344578 to 8344582 4 - TSS region transcription start site region 158014
Gm8189 19 8477273 to 8541800 64527 - pseudogene predicted gene 8189
Tssr158015 19 8479030 to 8479034 4 - TSS region transcription start site region 158015
Tssr158016 19 8518975 to 8518998 23 - TSS region transcription start site region 158016
Cpgi10564 19 8569626 to 8569815 189 CpG island CpG island 10564
Gm6425 19 8588407 to 8589196 789 - pseudogene predicted pseudogene 6425
Tssr154777 19 8591173 to 8591180 7 + TSS region transcription start site region 154777
Slc22a8 19 8591254 to 8611834 20580 + protein coding gene solute carrier family 22 (organic anion transporter), member 8
Tssr154778 19 8591277 to 8591300 23 + TSS region transcription start site region 154778
Tssr154779 19 8593175 to 8593192 17 + TSS region transcription start site region 154779
Tssr154780 19 8594051 to 8594069 18 + TSS region transcription start site region 154780
Tssr154781 19 8594071 to 8594127 56 + TSS region transcription start site region 154781
Tssr154782 19 8594147 to 8594154 7 + TSS region transcription start site region 154782
Gm36394 19 8611932 to 8621184 9252 - lncRNA gene predicted gene, 36394