Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:7342434-7422449

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spindoc 19 7356464 to 7383026 26562 - protein coding gene spindlin interactor and repressor of chromatin binding
Gm46647 19 7370339 to 7372580 2241 - lncRNA gene predicted gene, 46647
Cpgi10554 19 7382173 to 7383342 1169 CpG island CpG island 10554
Tssr157969 19 7382434 to 7382449 15 - TSS region transcription start site region 157969
Tssr157970 19 7382944 to 7382976 32 - TSS region transcription start site region 157970
Tssr157971 19 7382985 to 7383000 15 - TSS region transcription start site region 157971
1700105P06Rik 19 7383003 to 7383561 558 + antisense lncRNA gene RIKEN cDNA 1700105P06 gene
Tssr157972 19 7383020 to 7383025 5 - TSS region transcription start site region 157972
Tssr157973 19 7383029 to 7383063 34 - TSS region transcription start site region 157973
Tssr154750 19 7383123 to 7383135 12 + TSS region transcription start site region 154750
Tssr154751 19 7383143 to 7383160 17 + TSS region transcription start site region 154751
Rab11b-ps2 19 7398421 to 7399077 656 - pseudogene RAB11B, member RAS oncogene family, pseudogene 2
Cpgi10555 19 7398829 to 7399055 226 CpG island CpG island 10555
Gm18842 19 7402834 to 7403431 597 - pseudogene predicted gene, 18842
Cpgi10556 19 7416584 to 7418602 2018 CpG island CpG island 10556
Tssr154752 19 7417127 to 7417229 102 + TSS region transcription start site region 154752
Tssr154753 19 7417586 to 7417650 64 + TSS region transcription start site region 154753
2700081O15Rik 19 7417625 to 7425904 8279 + protein coding gene RIKEN cDNA 2700081O15 gene
Tssr157974 19 7418306 to 7418309 3 - TSS region transcription start site region 157974
Cpgi10557 19 7421310 to 7421474 164 CpG island CpG island 10557
Cpgi10558 19 7421952 to 7423890 1938 CpG island CpG island 10558