Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:7221848-7461863

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78 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr154739 19 7221869 to 7221877 8 + TSS region transcription start site region 154739
Naa40 19 7225668 to 7241222 15554 - protein coding gene N(alpha)-acetyltransferase 40, NatD catalytic subunit
Tssr157946 19 7232991 to 7232994 3 - TSS region transcription start site region 157946
Cpgi10551 19 7240437 to 7241599 1162 CpG island CpG island 10551
Tssr157947 19 7240998 to 7241076 78 - TSS region transcription start site region 157947
Tssr157948 19 7241147 to 7241160 13 - TSS region transcription start site region 157948
Tssr157949 19 7241162 to 7241199 37 - TSS region transcription start site region 157949
Tssr157950 19 7241216 to 7241226 10 - TSS region transcription start site region 157950
Gm22113 19 7246709 to 7246812 103 + snRNA gene predicted gene, 22113
Gm23997 19 7259941 to 7260061 120 + rRNA gene predicted gene, 23997
Tssr157951 19 7261418 to 7261450 32 - TSS region transcription start site region 157951
Tssr154740 19 7265171 to 7265182 11 + TSS region transcription start site region 154740
Tssr157952 19 7265910 to 7265921 11 - TSS region transcription start site region 157952
Cpgi10552 19 7267061 to 7269385 2324 CpG island CpG island 10552
Rcor2 19 7267394 to 7275225 7831 + protein coding gene REST corepressor 2
Tssr157953 19 7267431 to 7267449 18 - TSS region transcription start site region 157953
Tssr154741 19 7268194 to 7268212 18 + TSS region transcription start site region 154741
Tssr154742 19 7268235 to 7268294 59 + TSS region transcription start site region 154742
Tssr154743 19 7268296 to 7268313 17 + TSS region transcription start site region 154743
Tssr154744 19 7268713 to 7268732 19 + TSS region transcription start site region 154744
Tssr154745 19 7270135 to 7270155 20 + TSS region transcription start site region 154745
Tssr154746 19 7274442 to 7274453 11 + TSS region transcription start site region 154746
Mark2 19 7275396 to 7341860 66464 - protein coding gene MAP/microtubule affinity regulating kinase 2
Tssr157954 19 7275845 to 7275858 13 - TSS region transcription start site region 157954
Tssr157955 19 7275859 to 7275889 30 - TSS region transcription start site region 157955
Tssr157956 19 7275936 to 7275964 28 - TSS region transcription start site region 157956
Tssr157957 19 7288512 to 7288516 4 - TSS region transcription start site region 157957
Tssr157958 19 7295077 to 7295110 33 - TSS region transcription start site region 157958
Tssr157959 19 7295394 to 7295468 74 - TSS region transcription start site region 157959
Tssr5427 19 7297584 to 7297591 7 - TSS region transcription start site region 5427
Tssr157960 19 7297596 to 7297603 7 - TSS region transcription start site region 157960
Tssr157961 19 7297608 to 7297636 28 - TSS region transcription start site region 157961
Tssr157962 19 7297639 to 7297648 9 - TSS region transcription start site region 157962
Gm17227 19 7297654 to 7304361 6707 + antisense lncRNA gene predicted gene 17227
Tssr154747 19 7297674 to 7297693 19 + TSS region transcription start site region 154747
Tssr154748 19 7297710 to 7297722 12 + TSS region transcription start site region 154748
Tssr154749 19 7297724 to 7297733 9 + TSS region transcription start site region 154749
Tssr157963 19 7323084 to 7323087 3 - TSS region transcription start site region 157963
D830016O14Rik 19 7324970 to 7327375 2405 unclassified gene RIKEN cDNA D830016O14 gene
Tssr157964 19 7333140 to 7333143 3 - TSS region transcription start site region 157964
Tssr157965 19 7334206 to 7334229 23 - TSS region transcription start site region 157965
Cpgi10553 19 7340485 to 7342296 1811 CpG island CpG island 10553
Tssr157966 19 7341571 to 7341647 76 - TSS region transcription start site region 157966
Tssr157967 19 7341792 to 7341829 37 - TSS region transcription start site region 157967
Tssr157968 19 7341848 to 7341863 15 - TSS region transcription start site region 157968
Spindoc 19 7356464 to 7383026 26562 - protein coding gene spindlin interactor and repressor of chromatin binding
Gm46647 19 7370339 to 7372580 2241 - lncRNA gene predicted gene, 46647
Cpgi10554 19 7382173 to 7383342 1169 CpG island CpG island 10554
Tssr157969 19 7382434 to 7382449 15 - TSS region transcription start site region 157969
Tssr157970 19 7382944 to 7382976 32 - TSS region transcription start site region 157970
Tssr157971 19 7382985 to 7383000 15 - TSS region transcription start site region 157971
1700105P06Rik 19 7383003 to 7383561 558 + antisense lncRNA gene RIKEN cDNA 1700105P06 gene
Tssr157972 19 7383020 to 7383025 5 - TSS region transcription start site region 157972
Tssr157973 19 7383029 to 7383063 34 - TSS region transcription start site region 157973
Tssr154750 19 7383123 to 7383135 12 + TSS region transcription start site region 154750
Tssr154751 19 7383143 to 7383160 17 + TSS region transcription start site region 154751
Rab11b-ps2 19 7398421 to 7399077 656 - pseudogene RAB11B, member RAS oncogene family, pseudogene 2
Cpgi10555 19 7398829 to 7399055 226 CpG island CpG island 10555
Gm18842 19 7402834 to 7403431 597 - pseudogene predicted gene, 18842
Cpgi10556 19 7416584 to 7418602 2018 CpG island CpG island 10556
Tssr154752 19 7417127 to 7417229 102 + TSS region transcription start site region 154752
Tssr154753 19 7417586 to 7417650 64 + TSS region transcription start site region 154753
2700081O15Rik 19 7417625 to 7425904 8279 + protein coding gene RIKEN cDNA 2700081O15 gene
Tssr157974 19 7418306 to 7418309 3 - TSS region transcription start site region 157974
Cpgi10557 19 7421310 to 7421474 164 CpG island CpG island 10557
Cpgi10558 19 7421952 to 7423890 1938 CpG island CpG island 10558
Mir6991 19 7422573 to 7422642 69 + miRNA gene microRNA 6991
Rtn3 19 7425901 to 7483289 57388 - protein coding gene reticulon 3
Tssr157975 19 7426519 to 7426559 40 - TSS region transcription start site region 157975
Tssr157976 19 7426822 to 7426835 13 - TSS region transcription start site region 157976
Tssr157977 19 7427141 to 7427156 15 - TSS region transcription start site region 157977
Tssr157978 19 7427673 to 7427700 27 - TSS region transcription start site region 157978
Tssr157979 19 7431018 to 7431037 19 - TSS region transcription start site region 157979
Tssr157980 19 7432008 to 7432052 44 - TSS region transcription start site region 157980
Tssr157981 19 7432494 to 7432512 18 - TSS region transcription start site region 157981
Tssr157982 19 7439658 to 7439668 10 - TSS region transcription start site region 157982
Tssr157983 19 7441560 to 7441579 19 - TSS region transcription start site region 157983
Tssr157984 19 7441580 to 7441616 36 - TSS region transcription start site region 157984