Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:6452063-6552808

36 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Nrxn2	19	6418738 to 6533217	114479	+	protein coding gene	neurexin II
Cpgi10520	19	6497095 to 6498940	1845		CpG island	CpG island 10520
Tssr154661	19	6497412 to 6497449	37	+	TSS region	transcription start site region 154661
Tssr154662	19	6497452 to 6497487	35	+	TSS region	transcription start site region 154662
Tssr154663	19	6497587 to 6497666	79	+	TSS region	transcription start site region 154663
Tssr154664	19	6497674 to 6497687	13	+	TSS region	transcription start site region 154664
Tssr154665	19	6497724 to 6497744	20	+	TSS region	transcription start site region 154665
Tssr154666	19	6497758 to 6497764	6	+	TSS region	transcription start site region 154666
Tssr154667	19	6497772 to 6497845	73	+	TSS region	transcription start site region 154667
Tssr154668	19	6497877 to 6497921	44	+	TSS region	transcription start site region 154668
Tssr154669	19	6497932 to 6497943	11	+	TSS region	transcription start site region 154669
Tssr154670	19	6497949 to 6497979	30	+	TSS region	transcription start site region 154670
Tssr154671	19	6498024 to 6498037	13	+	TSS region	transcription start site region 154671
Tssr154672	19	6498081 to 6498089	8	+	TSS region	transcription start site region 154672
Tssr154673	19	6498166 to 6498173	7	+	TSS region	transcription start site region 154673
Cpgi10521	19	6502063 to 6502808	745		CpG island	CpG island 10521
Gm14964	19	6530711 to 6532011	1300	-	antisense lncRNA gene	predicted gene 14964
Cpgi10522	19	6531052 to 6532366	1314		CpG island	CpG island 10522
Tssr154674	19	6531146 to 6531229	83	+	TSS region	transcription start site region 154674
Tssr5425	19	6531606 to 6531617	11	+	TSS region	transcription start site region 5425
Tssr157855	19	6531979 to 6531994	15	-	TSS region	transcription start site region 157855
Tssr157856	19	6532012 to 6532023	11	-	TSS region	transcription start site region 157856
Tssr157857	19	6532110 to 6532151	41	-	TSS region	transcription start site region 157857
Tssr154675	19	6532230 to 6532240	10	+	TSS region	transcription start site region 154675
Tssr157858	19	6532264 to 6532286	22	-	TSS region	transcription start site region 157858
Tssr157859	19	6532345 to 6532367	22	-	TSS region	transcription start site region 157859
Tssr157860	19	6532372 to 6532391	19	-	TSS region	transcription start site region 157860
Tssr154676	19	6532485 to 6532498	13	+	TSS region	transcription start site region 154676
Slc22a12	19	6535845 to 6543019	7174	-	protein coding gene	solute carrier family 22 (organic anion/cation transporter), member 12
Tssr157861	19	6541665 to 6541670	5	-	TSS region	transcription start site region 157861
Tssr157862	19	6542989 to 6543014	25	-	TSS region	transcription start site region 157862
Tssr157863	19	6543019 to 6543039	20	-	TSS region	transcription start site region 157863
Tssr157864	19	6543064 to 6543075	11	-	TSS region	transcription start site region 157864
Tssr157865	19	6543082 to 6543088	6	-	TSS region	transcription start site region 157865
Gm14967	19	6543771 to 6544899	1128	-	antisense lncRNA gene	predicted gene 14967
Cpgi10523	19	6549566 to 6549721	155		CpG island	CpG island 10523