Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:6298860-6488900

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ehd1 19 6276896 to 6300096 23200 + protein coding gene EH-domain containing 1
Tssr154613 19 6298845 to 6298863 18 + TSS region transcription start site region 154613
Tssr157850 19 6298891 to 6298902 11 - TSS region transcription start site region 157850
Tssr154614 19 6299124 to 6299154 30 + TSS region transcription start site region 154614
Tssr157851 19 6299579 to 6299619 40 - TSS region transcription start site region 157851
Tssr154615 19 6299726 to 6299748 22 + TSS region transcription start site region 154615
Tssr154616 19 6299771 to 6299782 11 + TSS region transcription start site region 154616
Cpgi10506 19 6305962 to 6307045 1083 CpG island CpG island 10506
Cdc42bpg 19 6306457 to 6325653 19196 + protein coding gene CDC42 binding protein kinase gamma (DMPK-like)
Tssr154617 19 6306538 to 6306553 15 + TSS region transcription start site region 154617
Tssr154618 19 6306626 to 6306638 12 + TSS region transcription start site region 154618
Tssr154619 19 6306872 to 6306896 24 + TSS region transcription start site region 154619
Tssr157852 19 6307836 to 6307845 9 - TSS region transcription start site region 157852
Cpgi10507 19 6334954 to 6335900 946 CpG island CpG island 10507
Men1 19 6334979 to 6340891 5912 + protein coding gene multiple endocrine neoplasia 1
Tssr154620 19 6335015 to 6335070 55 + TSS region transcription start site region 154620
Tssr154621 19 6335093 to 6335113 20 + TSS region transcription start site region 154621
Cpgi10508 19 6339909 to 6340105 196 CpG island CpG island 10508
Cpgi10509 19 6340724 to 6341998 1274 CpG island CpG island 10509
Tssr154622 19 6341121 to 6341247 126 + TSS region transcription start site region 154622
Map4k2 19 6341135 to 6355615 14480 + protein coding gene mitogen-activated protein kinase kinase kinase kinase 2
Tssr154623 19 6341423 to 6341486 63 + TSS region transcription start site region 154623
Tssr154624 19 6341746 to 6341793 47 + TSS region transcription start site region 154624
Tssr154625 19 6342534 to 6342542 8 + TSS region transcription start site region 154625
Tssr154626 19 6342549 to 6342560 11 + TSS region transcription start site region 154626
Tssr154627 19 6342562 to 6342573 11 + TSS region transcription start site region 154627
Tssr154628 19 6343782 to 6343793 11 + TSS region transcription start site region 154628
Tssr154629 19 6346411 to 6346425 14 + TSS region transcription start site region 154629
Mir6989 19 6346480 to 6346544 64 + miRNA gene microRNA 6989
Gm14966 19 6355522 to 6363759 8237 - antisense lncRNA gene predicted gene 14966
Tssr157853 19 6363213 to 6363230 17 - TSS region transcription start site region 157853
Cpgi10510 19 6363256 to 6364823 1567 CpG island CpG island 10510
Tssr157854 19 6363340 to 6363429 89 - TSS region transcription start site region 157854
Tssr154630 19 6363671 to 6363704 33 + TSS region transcription start site region 154630
Sf1 19 6363690 to 6378030 14340 + protein coding gene splicing factor 1
Tssr154631 19 6363726 to 6363737 11 + TSS region transcription start site region 154631
Tssr154632 19 6363896 to 6363941 45 + TSS region transcription start site region 154632
Tssr154633 19 6363946 to 6363960 14 + TSS region transcription start site region 154633
Tssr154634 19 6363989 to 6364042 53 + TSS region transcription start site region 154634
Tssr154635 19 6364578 to 6364668 90 + TSS region transcription start site region 154635
Tssr154636 19 6372582 to 6372598 16 + TSS region transcription start site region 154636
Tssr154637 19 6373641 to 6373660 19 + TSS region transcription start site region 154637
Tssr154638 19 6373670 to 6373718 48 + TSS region transcription start site region 154638
Tssr154639 19 6374771 to 6374791 20 + TSS region transcription start site region 154639
Tssr154640 19 6376012 to 6376017 5 + TSS region transcription start site region 154640
Tssr154641 19 6376538 to 6376558 20 + TSS region transcription start site region 154641
Tssr154642 19 6384395 to 6384422 27 + TSS region transcription start site region 154642
Pygm 19 6384408 to 6398464 14056 + protein coding gene muscle glycogen phosphorylase
Tssr154643 19 6384453 to 6384456 3 + TSS region transcription start site region 154643
Tssr154644 19 6386034 to 6386056 22 + TSS region transcription start site region 154644
Tssr154645 19 6386411 to 6386427 16 + TSS region transcription start site region 154645
Cpgi10511 19 6388113 to 6388343 230 CpG island CpG island 10511
Tssr154646 19 6389540 to 6389555 15 + TSS region transcription start site region 154646
Cpgi10512 19 6389591 to 6390135 544 CpG island CpG island 10512
Tssr154647 19 6389793 to 6389804 11 + TSS region transcription start site region 154647
Tssr154648 19 6393709 to 6393729 20 + TSS region transcription start site region 154648
Tssr5423 19 6393860 to 6393900 40 + TSS region transcription start site region 5423
Tssr154649 19 6396554 to 6396556 2 + TSS region transcription start site region 154649
Tssr154650 19 6397640 to 6397659 19 + TSS region transcription start site region 154650
Tssr154651 19 6398140 to 6398155 15 + TSS region transcription start site region 154651
Cpgi10513 19 6398573 to 6400659 2086 CpG island CpG island 10513
Tssr5424 19 6398737 to 6398764 27 + TSS region transcription start site region 5424
Rasgrp2 19 6399340 to 6415216 15876 + protein coding gene RAS, guanyl releasing protein 2
Tssr154652 19 6399835 to 6399855 20 + TSS region transcription start site region 154652
Tssr154653 19 6399857 to 6399890 33 + TSS region transcription start site region 154653
Tssr154654 19 6400523 to 6400559 36 + TSS region transcription start site region 154654
Tssr154655 19 6400611 to 6400622 11 + TSS region transcription start site region 154655
Cpgi10514 19 6401405 to 6401898 493 CpG island CpG island 10514
Tssr154656 19 6401675 to 6401715 40 + TSS region transcription start site region 154656
Cpgi10515 19 6404675 to 6405112 437 CpG island CpG island 10515
Tssr154657 19 6408399 to 6408410 11 + TSS region transcription start site region 154657
Gm14965 19 6409400 to 6418606 9206 - lncRNA gene predicted gene 14965
Tssr154658 19 6413071 to 6413087 16 + TSS region transcription start site region 154658
Cpgi10516 19 6413076 to 6413318 242 CpG island CpG island 10516
Tssr154659 19 6413105 to 6413130 25 + TSS region transcription start site region 154659
Cpgi10517 19 6418245 to 6419355 1110 CpG island CpG island 10517
Tssr154660 19 6418733 to 6418810 77 + TSS region transcription start site region 154660
Nrxn2 19 6418738 to 6533217 114479 + protein coding gene neurexin II
Cpgi10518 19 6420613 to 6420807 194 CpG island CpG island 10518
Cpgi10519 19 6427613 to 6429221 1608 CpG island CpG island 10519