Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:60789552-61659610

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90 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eif3a 19 60761116 to 60790693 29577 - protein coding gene eukaryotic translation initiation factor 3, subunit A
Cpgi11138 19 60789883 to 60791163 1280 CpG island CpG island 11138
Gm10751 19 60790019 to 60791665 1646 protein coding gene predicted gene 10751
Tssr160070 19 60790563 to 60790570 7 - TSS region transcription start site region 160070
Tssr160071 19 60790584 to 60790602 18 - TSS region transcription start site region 160071
Tssr160072 19 60790617 to 60790672 55 - TSS region transcription start site region 160072
Tssr160073 19 60790692 to 60790700 8 - TSS region transcription start site region 160073
Tssr160074 19 60790708 to 60790713 5 - TSS region transcription start site region 160074
Tssr160075 19 60791010 to 60791053 43 - TSS region transcription start site region 160075
Cpgi11139 19 60811276 to 60812020 744 CpG island CpG island 11139
Tssr157365 19 60811574 to 60811619 45 + TSS region transcription start site region 157365
Fam45a 19 60811585 to 60836227 24642 + protein coding gene family with sequence similarity 45, member A
Tssr157366 19 60811836 to 60811879 43 + TSS region transcription start site region 157366
Tssr160076 19 60812189 to 60812208 19 - TSS region transcription start site region 160076
Tssr5575 19 60812220 to 60812221 1 - TSS region transcription start site region 5575
Gm15959 19 60815449 to 60815816 367 - pseudogene predicted gene 15959
Sfxn4 19 60837277 to 60861479 24202 - protein coding gene sideroflexin 4
Tssr160077 19 60860656 to 60860659 3 - TSS region transcription start site region 160077
Cpgi11140 19 60861202 to 60861653 451 CpG island CpG island 11140
Tssr160078 19 60861390 to 60861462 72 - TSS region transcription start site region 160078
Prdx3 19 60864066 to 60874538 10472 - protein coding gene peroxiredoxin 3
Tssr160079 19 60864201 to 60864205 4 - TSS region transcription start site region 160079
Tssr160080 19 60864432 to 60864450 18 - TSS region transcription start site region 160080
Cpgi11141 19 60874251 to 60874715 464 CpG island CpG island 11141
Tssr160081 19 60874472 to 60874510 38 - TSS region transcription start site region 160081
Tssr160082 19 60874526 to 60874550 24 - TSS region transcription start site region 160082
Tssr160083 19 60874564 to 60874568 4 - TSS region transcription start site region 160083
Cpgi11142 19 60889657 to 60890836 1179 CpG island CpG island 11142
Grk5 19 60889749 to 61092553 202804 + protein coding gene G protein-coupled receptor kinase 5
Tssr5576 19 60890289 to 60890299 10 + TSS region transcription start site region 5576
Tssr157367 19 60890363 to 60890392 29 + TSS region transcription start site region 157367
Tssr157368 19 60896209 to 60896212 3 + TSS region transcription start site region 157368
6030458E02Rik 19 60914611 to 60915766 1155 unclassified gene RIKEN cDNA 6030458E02 gene
Gm41885 19 60926467 to 60933440 6973 - protein coding gene predicted gene, 41885
Gm9529 19 60966672 to 60967254 582 - pseudogene predicted gene 9529
Tssr160084 19 60994272 to 60994298 26 - TSS region transcription start site region 160084
D19Jpk2 19 61009715 to 61009840 125 DNA segment DNA segment, Chr 19, Japan, Kominami 2
Gm22520 19 61013417 to 61013545 128 - snoRNA gene predicted gene, 22520
D19Dcr72 19 61013584 to 61013679 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 72
Tssr157369 19 61050892 to 61050894 2 + TSS region transcription start site region 157369
Zfp950 19 61053840 to 61140840 87000 - protein coding gene zinc finger protein 950
Tssr160085 19 61122609 to 61122613 4 - TSS region transcription start site region 160085
Gm4238 19 61134834 to 61135218 384 + pseudogene predicted gene 4238
Tssr160086 19 61140748 to 61140769 21 - TSS region transcription start site region 160086
Tssr160087 19 61140772 to 61140823 51 - TSS region transcription start site region 160087
Tssr157370 19 61151603 to 61151618 15 + TSS region transcription start site region 157370
Cpgi11143 19 61151821 to 61152091 270 CpG island CpG island 11143
Tssr157371 19 61151838 to 61151871 33 + TSS region transcription start site region 157371
Gm22365 19 61164365 to 61164481 116 - snRNA gene predicted gene, 22365
Gm5521 19 61166962 to 61168763 1801 + pseudogene predicted gene 5521
Tssr157372 19 61166973 to 61166979 6 + TSS region transcription start site region 157372
Gm7102 19 61174686 to 61176309 1623 - protein coding gene predicted gene 7102
Cpgi11144 19 61175758 to 61176297 539 CpG island CpG island 11144
Tssr157373 19 61176098 to 61176122 24 + TSS region transcription start site region 157373
Gm6020 19 61183890 to 61183955 65 + pseudogene predicted gene 6020
Tssr160088 19 61198749 to 61198767 18 - TSS region transcription start site region 160088
Tssr160089 19 61198769 to 61198781 12 - TSS region transcription start site region 160089
Cpgi11145 19 61199426 to 61199878 452 CpG island CpG island 11145
Tssr157374 19 61224397 to 61224440 43 + TSS region transcription start site region 157374
Csf2ra 19 61224402 to 61228418 4016 - protein coding gene colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)
Tssr157375 19 61224471 to 61224483 12 + TSS region transcription start site region 157375
Tssr157376 19 61224513 to 61224545 32 + TSS region transcription start site region 157376
Tssr157377 19 61224552 to 61224610 58 + TSS region transcription start site region 157377
Tssr160090 19 61224587 to 61224606 19 - TSS region transcription start site region 160090
Tssr160091 19 61224609 to 61224630 21 - TSS region transcription start site region 160091
Tssr157378 19 61224673 to 61224684 11 + TSS region transcription start site region 157378
Tssr157379 19 61224706 to 61224762 56 + TSS region transcription start site region 157379
Tssr160092 19 61224736 to 61224754 18 - TSS region transcription start site region 160092
Tssr160093 19 61224838 to 61224849 11 - TSS region transcription start site region 160093
Tssr160094 19 61224901 to 61224911 10 - TSS region transcription start site region 160094
Cpgi11146 19 61224911 to 61228872 3961 CpG island CpG island 11146
Tssr160095 19 61224987 to 61224998 11 - TSS region transcription start site region 160095
Tssr160096 19 61225408 to 61225446 38 - TSS region transcription start site region 160096
Tssr160097 19 61225599 to 61225642 43 - TSS region transcription start site region 160097
Tssr160098 19 61226076 to 61226102 26 - TSS region transcription start site region 160098
Tssr160099 19 61226284 to 61226305 21 - TSS region transcription start site region 160099
Tssr160100 19 61226337 to 61226381 44 - TSS region transcription start site region 160100
Tssr160101 19 61226650 to 61226700 50 - TSS region transcription start site region 160101
Tssr160102 19 61227193 to 61227218 25 - TSS region transcription start site region 160102
Tssr160103 19 61227305 to 61227376 71 - TSS region transcription start site region 160103
Tssr157380 19 61227492 to 61227503 11 + TSS region transcription start site region 157380
Tssr157381 19 61227757 to 61227761 4 + TSS region transcription start site region 157381
Tssr160104 19 61228386 to 61228395 9 - TSS region transcription start site region 160104
Tssr160105 19 61228396 to 61228454 58 - TSS region transcription start site region 160105
Gm4242 19 61231819 to 61233341 1522 - unclassified gene predicted gene 4242
Gm18999 19 61255810 to 61258626 2816 + pseudogene predicted gene, 18999
Cpgi11147 19 61257832 to 61258031 199 CpG island CpG island 11147
Gm21060 19 61296902 to 61297069 167 - protein coding gene predicted gene, 21060
Gm20762 19 61304837 to 61305295 458 - pseudogene predicted gene, 20762
n-TMcat19 19 61320836 to 61320908 72 - tRNA gene nuclear encoded tRNA methionine 19 (anticodon CAT)