Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:59980885-60782027

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm41879 19 60035900 to 60039033 3133 - lncRNA gene predicted gene, 41879
Gm41880 19 60040385 to 60050388 10003 - lncRNA gene predicted gene, 41880
Csf1r-ps 19 60079370 to 60081998 2628 + pseudogene colony stimulating factor 1 receptor (granulocyte), pseudogene
Gm46663 19 60107521 to 60116299 8778 - lncRNA gene predicted gene, 46663
Gm41881 19 60135549 to 60140383 4834 - lncRNA gene predicted gene, 41881
Tssr157353 19 60144591 to 60144602 11 + TSS region transcription start site region 157353
E330013P04Rik 19 60144675 to 60162591 17916 + lincRNA gene RIKEN cDNA E330013P04 gene
Tssr157354 19 60144682 to 60144697 15 + TSS region transcription start site region 157354
Fam204a 19 60198586 to 60226697 28111 - protein coding gene family with sequence similarity 204, member A
Tssr160024 19 60224899 to 60224905 6 - TSS region transcription start site region 160024
Cpgi11134 19 60226177 to 60226809 632 CpG island CpG island 11134
4933412A08Rik 19 60226334 to 60227678 1344 + pseudogene RIKEN cDNA 4933412A08 gene
Tssr160025 19 60226638 to 60226649 11 - TSS region transcription start site region 160025
Tssr160026 19 60226666 to 60226706 40 - TSS region transcription start site region 160026
Gm28351 19 60241853 to 60243581 1728 + lincRNA gene predicted gene 28351
D19Dcr71 19 60278894 to 60278989 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 71
Gm41882 19 60310847 to 60325262 14415 - lncRNA gene predicted gene, 41882
Gm34300 19 60375885 to 60387027 11142 - lncRNA gene predicted gene, 34300
Prlhr 19 60466733 to 60468304 1571 - protein coding gene prolactin releasing hormone receptor
Cpgi11135 19 60466956 to 60468324 1368 CpG island CpG island 11135
Cacul1 19 60524696 to 60581023 56327 - protein coding gene CDK2 associated, cullin domain 1
Tssr160027 19 60534249 to 60534270 21 - TSS region transcription start site region 160027
Tssr160028 19 60537524 to 60537528 4 - TSS region transcription start site region 160028
Gm41884 19 60547430 to 60551112 3682 - lncRNA gene predicted gene, 41884
Tssr160029 19 60575807 to 60575811 4 - TSS region transcription start site region 160029
Cpgi11136 19 60580129 to 60581413 1284 CpG island CpG island 11136
Tssr160030 19 60580357 to 60580405 48 - TSS region transcription start site region 160030
Gm25238 19 60580529 to 60580617 88 + miRNA gene predicted gene, 25238
Gm41883 19 60580815 to 60629961 49146 + lncRNA gene predicted gene, 41883
Tssr5574 19 60580870 to 60580881 11 - TSS region transcription start site region 5574
Tssr160031 19 60580885 to 60580992 107 - TSS region transcription start site region 160031
Tssr160032 19 60580993 to 60581011 18 - TSS region transcription start site region 160032
Tssr160033 19 60581013 to 60581025 12 - TSS region transcription start site region 160033
Tssr160034 19 60581159 to 60581191 32 - TSS region transcription start site region 160034
Tssr157355 19 60581246 to 60581263 17 + TSS region transcription start site region 157355
Tssr157356 19 60598523 to 60598538 15 + TSS region transcription start site region 157356
Gm46652 19 60610880 to 60625486 14606 + lncRNA gene predicted gene, 46652
Tssr157357 19 60611300 to 60611312 12 + TSS region transcription start site region 157357
Gm34459 19 60657510 to 60676474 18964 - lncRNA gene predicted gene, 34459
Gm34406 19 60670478 to 60686424 15946 + lncRNA gene predicted gene, 34406
Tssr157358 19 60712867 to 60712876 9 + TSS region transcription start site region 157358
Cpgi11137 19 60755512 to 60757361 1849 CpG island CpG island 11137
Tssr157359 19 60755947 to 60755979 32 + TSS region transcription start site region 157359
Nanos1 19 60755987 to 60759913 3926 + protein coding gene nanos C2HC-type zinc finger 1
Tssr157360 19 60756166 to 60756182 16 + TSS region transcription start site region 157360
Tssr157361 19 60756368 to 60756391 23 + TSS region transcription start site region 157361
Eif3a 19 60761116 to 60790693 29577 - protein coding gene eukaryotic translation initiation factor 3, subunit A
Tssr160035 19 60764168 to 60764232 64 - TSS region transcription start site region 160035
Tssr157362 19 60764183 to 60764208 25 + TSS region transcription start site region 157362
Tssr157363 19 60766321 to 60766348 27 + TSS region transcription start site region 157363
Tssr160036 19 60766368 to 60766385 17 - TSS region transcription start site region 160036
Tssr157364 19 60766380 to 60766471 91 + TSS region transcription start site region 157364
Tssr160037 19 60766411 to 60766423 12 - TSS region transcription start site region 160037
Tssr160038 19 60766429 to 60766442 13 - TSS region transcription start site region 160038
Tssr160039 19 60766463 to 60766516 53 - TSS region transcription start site region 160039
Tssr160040 19 60766521 to 60766533 12 - TSS region transcription start site region 160040
Tssr160041 19 60766553 to 60766594 41 - TSS region transcription start site region 160041
Tssr160042 19 60766595 to 60766607 12 - TSS region transcription start site region 160042
Tssr160043 19 60766614 to 60766625 11 - TSS region transcription start site region 160043
Tssr160044 19 60766657 to 60766685 28 - TSS region transcription start site region 160044
Tssr160045 19 60766698 to 60766729 31 - TSS region transcription start site region 160045
Tssr160046 19 60766737 to 60766748 11 - TSS region transcription start site region 160046
Tssr160047 19 60766788 to 60766813 25 - TSS region transcription start site region 160047
Tssr160048 19 60766834 to 60766847 13 - TSS region transcription start site region 160048
Tssr160049 19 60766913 to 60766934 21 - TSS region transcription start site region 160049
Tssr160050 19 60766957 to 60766975 18 - TSS region transcription start site region 160050
Tssr160051 19 60767612 to 60767651 39 - TSS region transcription start site region 160051
Tssr160052 19 60768839 to 60768865 26 - TSS region transcription start site region 160052
Tssr160053 19 60768900 to 60768911 11 - TSS region transcription start site region 160053
Tssr160054 19 60769927 to 60769938 11 - TSS region transcription start site region 160054
Tssr160055 19 60769939 to 60769954 15 - TSS region transcription start site region 160055
Tssr160056 19 60769960 to 60770000 40 - TSS region transcription start site region 160056
Tssr160057 19 60770012 to 60770023 11 - TSS region transcription start site region 160057
Tssr160058 19 60771035 to 60771072 37 - TSS region transcription start site region 160058
Tssr160059 19 60771673 to 60771690 17 - TSS region transcription start site region 160059
Tssr160060 19 60771696 to 60771707 11 - TSS region transcription start site region 160060
Tssr160061 19 60771717 to 60771744 27 - TSS region transcription start site region 160061
Tssr160062 19 60772715 to 60772726 11 - TSS region transcription start site region 160062
Tssr160063 19 60772734 to 60772760 26 - TSS region transcription start site region 160063
Tssr160064 19 60772888 to 60772941 53 - TSS region transcription start site region 160064
Tssr160065 19 60773928 to 60773952 24 - TSS region transcription start site region 160065
Mir3084-2 19 60774329 to 60774397 68 - miRNA gene microRNA 3084-2
Snora19 19 60774330 to 60774385 55 - snoRNA gene small nucleolar RNA, H/ACA box 19
Gm26158 19 60775521 to 60775639 118 - snoRNA gene predicted gene, 26158
Tssr160066 19 60775809 to 60775823 14 - TSS region transcription start site region 160066
Tssr160067 19 60776652 to 60776713 61 - TSS region transcription start site region 160067