Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:59794899-60654905

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm46662 19 59760441 to 59822672 62231 - lncRNA gene predicted gene, 46662
Tssr157352 19 59837800 to 59837801 1 + TSS region transcription start site region 157352
Gm46660 19 59875343 to 59890238 14895 - lncRNA gene predicted gene, 46660
Tssr160017 19 59879223 to 59879245 22 - TSS region transcription start site region 160017
D19Mit108 19 59882973 to 59883082 109 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 108
Gm17203 19 59896241 to 59901062 4821 - lincRNA gene predicted gene 17203
Rab11fip2 19 59902884 to 59943654 40770 - protein coding gene RAB11 family interacting protein 2 (class I)
Tssr160018 19 59914060 to 59914083 23 - TSS region transcription start site region 160018
D19Dcr70 19 59926229 to 59926325 96 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 70
Cpgi11133 19 59942952 to 59943998 1046 CpG island CpG island 11133
Tssr160019 19 59943074 to 59943100 26 - TSS region transcription start site region 160019
Tssr160020 19 59943568 to 59943579 11 - TSS region transcription start site region 160020
Tssr160021 19 59943582 to 59943595 13 - TSS region transcription start site region 160021
Tssr160022 19 59943596 to 59943638 42 - TSS region transcription start site region 160022
Tssr160023 19 59943647 to 59943678 31 - TSS region transcription start site region 160023
Gm4219 19 59943722 to 59948398 4676 + unclassified non-coding RNA gene predicted gene 4219
Gm41879 19 60035900 to 60039033 3133 - lncRNA gene predicted gene, 41879
Gm41880 19 60040385 to 60050388 10003 - lncRNA gene predicted gene, 41880
Csf1r-ps 19 60079370 to 60081998 2628 + pseudogene colony stimulating factor 1 receptor (granulocyte), pseudogene
Gm46663 19 60107521 to 60116299 8778 - lncRNA gene predicted gene, 46663
Gm41881 19 60135549 to 60140383 4834 - lncRNA gene predicted gene, 41881
Tssr157353 19 60144591 to 60144602 11 + TSS region transcription start site region 157353
E330013P04Rik 19 60144675 to 60162591 17916 + lincRNA gene RIKEN cDNA E330013P04 gene
Tssr157354 19 60144682 to 60144697 15 + TSS region transcription start site region 157354
Fam204a 19 60198586 to 60226697 28111 - protein coding gene family with sequence similarity 204, member A
Tssr160024 19 60224899 to 60224905 6 - TSS region transcription start site region 160024
Cpgi11134 19 60226177 to 60226809 632 CpG island CpG island 11134
4933412A08Rik 19 60226334 to 60227678 1344 + pseudogene RIKEN cDNA 4933412A08 gene
Tssr160025 19 60226638 to 60226649 11 - TSS region transcription start site region 160025
Tssr160026 19 60226666 to 60226706 40 - TSS region transcription start site region 160026
Gm28351 19 60241853 to 60243581 1728 + lincRNA gene predicted gene 28351
D19Dcr71 19 60278894 to 60278989 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 71
Gm41882 19 60310847 to 60325262 14415 - lncRNA gene predicted gene, 41882
Gm34300 19 60375885 to 60387027 11142 - lncRNA gene predicted gene, 34300
Prlhr 19 60466733 to 60468304 1571 - protein coding gene prolactin releasing hormone receptor
Cpgi11135 19 60466956 to 60468324 1368 CpG island CpG island 11135
Cacul1 19 60524696 to 60581023 56327 - protein coding gene CDK2 associated, cullin domain 1
Tssr160027 19 60534249 to 60534270 21 - TSS region transcription start site region 160027
Tssr160028 19 60537524 to 60537528 4 - TSS region transcription start site region 160028
Gm41884 19 60547430 to 60551112 3682 - lncRNA gene predicted gene, 41884
Tssr160029 19 60575807 to 60575811 4 - TSS region transcription start site region 160029
Cpgi11136 19 60580129 to 60581413 1284 CpG island CpG island 11136
Tssr160030 19 60580357 to 60580405 48 - TSS region transcription start site region 160030
Gm25238 19 60580529 to 60580617 88 + miRNA gene predicted gene, 25238
Gm41883 19 60580815 to 60629961 49146 + lncRNA gene predicted gene, 41883
Tssr5574 19 60580870 to 60580881 11 - TSS region transcription start site region 5574
Tssr160031 19 60580885 to 60580992 107 - TSS region transcription start site region 160031
Tssr160032 19 60580993 to 60581011 18 - TSS region transcription start site region 160032
Tssr160033 19 60581013 to 60581025 12 - TSS region transcription start site region 160033
Tssr160034 19 60581159 to 60581191 32 - TSS region transcription start site region 160034
Tssr157355 19 60581246 to 60581263 17 + TSS region transcription start site region 157355
Tssr157356 19 60598523 to 60598538 15 + TSS region transcription start site region 157356
Gm46652 19 60610880 to 60625486 14606 + lncRNA gene predicted gene, 46652
Tssr157357 19 60611300 to 60611312 12 + TSS region transcription start site region 157357