Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:5960234-5996143

12 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pola2	19	5940543 to 5964206	23663	-	protein coding gene	polymerase (DNA directed), alpha 2
Cpgi10489	19	5963723 to 5964573	850		CpG island	CpG island 10489
Tssr157806	19	5964132 to 5964210	78	-	TSS region	transcription start site region 157806
Tssr154536	19	5964267 to 5964306	39	+	TSS region	transcription start site region 154536
Slc22a20	19	5970234 to 5986143	15909	-	protein coding gene	solute carrier family 22 (organic anion transporter), member 20
Gm31719	19	5970486 to 5984846	14360	+	lncRNA gene	predicted gene, 31719
Capn1	19	5988546 to 6015825	27279	-	protein coding gene	calpain 1
Tssr157807	19	5989166 to 5989185	19	-	TSS region	transcription start site region 157807
Tssr157808	19	5989270 to 5989311	41	-	TSS region	transcription start site region 157808
Tssr157809	19	5989347 to 5989360	13	-	TSS region	transcription start site region 157809
Tssr157810	19	5991578 to 5991627	49	-	TSS region	transcription start site region 157810
Tssr5421	19	5992087 to 5992105	18	-	TSS region	transcription start site region 5421