Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:59169648-59287370

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Vax1	19	59166187 to 59170056	3869	-	protein coding gene	ventral anterior homeobox 1
Cpgi11118	19	59169054 to 59170542	1488		CpG island	CpG island 11118
Tssr160005	19	59170385 to 59170405	20	-	TSS region	transcription start site region 160005
Tssr160006	19	59171488 to 59171492	4	-	TSS region	transcription start site region 160006
4930442E04Rik	19	59171624 to 59184456	12832	+	lncRNA gene	RIKEN cDNA 4930442E04 gene
Cpgi11119	19	59171631 to 59172371	740		CpG island	CpG island 11119
Tssr157335	19	59171744 to 59171749	5	+	TSS region	transcription start site region 157335
Tssr157336	19	59171775 to 59171786	11	+	TSS region	transcription start site region 157336
Cpgi11120	19	59193915 to 59194568	653		CpG island	CpG island 11120
Kcnk18	19	59219648 to 59237370	17722	+	protein coding gene	potassium channel, subfamily K, member 18
Cpgi11121	19	59235193 to 59235457	264		CpG island	CpG island 11121
Cpgi11122	19	59239524 to 59239745	221		CpG island	CpG island 11122
Gm29261	19	59259512 to 59261419	1907	-	antisense lncRNA gene	predicted gene 29261
Cpgi11123	19	59260744 to 59261612	868		CpG island	CpG island 11123
Slc18a2	19	59260878 to 59296012	35134	+	protein coding gene	solute carrier family 18 (vesicular monoamine), member 2
Tssr157337	19	59260889 to 59260901	12	+	TSS region	transcription start site region 157337
Tssr157338	19	59260915 to 59260932	17	+	TSS region	transcription start site region 157338
Tssr157339	19	59284214 to 59284238	24	+	TSS region	transcription start site region 157339