Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:58793432-59093441

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1700019N19Rik 19 58785803 to 58794414 8611 - protein coding gene RIKEN cDNA 1700019N19 gene
Tssr159979 19 58794400 to 58794428 28 - TSS region transcription start site region 159979
Tssr159980 19 58794436 to 58794455 19 - TSS region transcription start site region 159980
Gm41877 19 58794515 to 58802121 7606 + lncRNA gene predicted gene, 41877
Hspa12a 19 58795751 to 58860984 65233 - protein coding gene heat shock protein 12A
Cpgi11112 19 58799425 to 58799921 496 CpG island CpG island 11112
Tssr159981 19 58807528 to 58807533 5 - TSS region transcription start site region 159981
Tssr157327 19 58818864 to 58818904 40 + TSS region transcription start site region 157327
Tssr159982 19 58822438 to 58822447 9 - TSS region transcription start site region 159982
Tssr159983 19 58822451 to 58822469 18 - TSS region transcription start site region 159983
Tssr159984 19 58822521 to 58822532 11 - TSS region transcription start site region 159984
Tssr159985 19 58822536 to 58822558 22 - TSS region transcription start site region 159985
Tssr5573 19 58860001 to 58860026 25 + TSS region transcription start site region 5573
Cpgi11113 19 58860676 to 58861405 729 CpG island CpG island 11113
Tssr159986 19 58860948 to 58860970 22 - TSS region transcription start site region 159986
Tssr159987 19 58860975 to 58860997 22 - TSS region transcription start site region 159987
Tssr159988 19 58861013 to 58861022 9 - TSS region transcription start site region 159988
4930433M22Rik 19 58873929 to 58875137 1208 unclassified gene RIKEN cDNA 4930433M22 gene
Mir3086 19 58911673 to 58911759 86 - miRNA gene microRNA 3086
Cpgi11114 19 58943023 to 58944029 1006 CpG island CpG island 11114
Tssr157328 19 58943384 to 58943410 26 + TSS region transcription start site region 157328
Tssr157329 19 58943413 to 58943431 18 + TSS region transcription start site region 157329
Eno4 19 58943425 to 58971421 27996 + protein coding gene enolase 4
Tssr157330 19 58943432 to 58943441 9 + TSS region transcription start site region 157330
Tssr159989 19 58943557 to 58943572 15 - TSS region transcription start site region 159989
Tssr159990 19 58943576 to 58943593 17 - TSS region transcription start site region 159990
Tssr159991 19 58943594 to 58943648 54 - TSS region transcription start site region 159991
Shtn1 19 58973358 to 59076069 102711 - protein coding gene shootin 1
Tssr157331 19 58980118 to 58980127 9 + TSS region transcription start site region 157331
Tssr159992 19 58982935 to 58982949 14 - TSS region transcription start site region 159992
Tssr159993 19 58987984 to 58987999 15 - TSS region transcription start site region 159993
Tssr159994 19 58988059 to 58988068 9 - TSS region transcription start site region 159994
Tssr159995 19 58991711 to 58991737 26 - TSS region transcription start site region 159995
Tssr159996 19 59031618 to 59031659 41 - TSS region transcription start site region 159996
Tssr159997 19 59041918 to 59041935 17 - TSS region transcription start site region 159997
Tssr159998 19 59041953 to 59041970 17 - TSS region transcription start site region 159998
Cpgi11115 19 59075022 to 59076072 1050 CpG island CpG island 11115
Tssr157332 19 59075031 to 59075097 66 + TSS region transcription start site region 157332
Tssr159999 19 59075501 to 59075522 21 - TSS region transcription start site region 159999
Tssr160000 19 59075530 to 59075537 7 - TSS region transcription start site region 160000
Tssr160001 19 59075583 to 59075592 9 - TSS region transcription start site region 160001
Tssr160002 19 59075610 to 59075644 34 - TSS region transcription start site region 160002
Tssr160003 19 59076264 to 59076281 17 - TSS region transcription start site region 160003
Tssr160004 19 59076284 to 59076320 36 - TSS region transcription start site region 160004
Tssr157333 19 59081437 to 59081451 14 + TSS region transcription start site region 157333
Tssr157334 19 59081610 to 59081646 36 + TSS region transcription start site region 157334
Gm9276 19 59087487 to 59089034 1547 + pseudogene predicted gene 9276