Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:58733929-59015137

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pnliprp1 19 58728887 to 58744169 15282 + protein coding gene pancreatic lipase related protein 1
Tssr157305 19 58734659 to 58734733 74 + TSS region transcription start site region 157305
Tssr159969 19 58734676 to 58734700 24 - TSS region transcription start site region 159969
Tssr157306 19 58734892 to 58734951 59 + TSS region transcription start site region 157306
Tssr159970 19 58734939 to 58734954 15 - TSS region transcription start site region 159970
Tssr157307 19 58736994 to 58737027 33 + TSS region transcription start site region 157307
Tssr157308 19 58737028 to 58737045 17 + TSS region transcription start site region 157308
Tssr159971 19 58737039 to 58737062 23 - TSS region transcription start site region 159971
Tssr157309 19 58737059 to 58737080 21 + TSS region transcription start site region 157309
Tssr157310 19 58738135 to 58738256 121 + TSS region transcription start site region 157310
Tssr157311 19 58738272 to 58738282 10 + TSS region transcription start site region 157311
Tssr157312 19 58738303 to 58738312 9 + TSS region transcription start site region 157312
Tssr157313 19 58738354 to 58738365 11 + TSS region transcription start site region 157313
Tssr157314 19 58739445 to 58739451 6 + TSS region transcription start site region 157314
Tssr157315 19 58740441 to 58740485 44 + TSS region transcription start site region 157315
Tssr157316 19 58740487 to 58740505 18 + TSS region transcription start site region 157316
Tssr157317 19 58740514 to 58740528 14 + TSS region transcription start site region 157317
Tssr157318 19 58741077 to 58741125 48 + TSS region transcription start site region 157318
Tssr157319 19 58741210 to 58741224 14 + TSS region transcription start site region 157319
1810073G21Rik 19 58742042 to 58743760 1718 unclassified gene RIKEN cDNA 1810073G21 gene
Tssr157320 19 58744036 to 58744066 30 + TSS region transcription start site region 157320
Tssr157321 19 58744072 to 58744094 22 + TSS region transcription start site region 157321
Tssr159972 19 58744073 to 58744086 13 - TSS region transcription start site region 159972
Tssr157322 19 58744095 to 58744113 18 + TSS region transcription start site region 157322
Tssr157323 19 58744114 to 58744125 11 + TSS region transcription start site region 157323
Tssr157324 19 58744131 to 58744142 11 + TSS region transcription start site region 157324
Tssr159973 19 58744158 to 58744170 12 - TSS region transcription start site region 159973
D19Mit138 19 58752962 to 58753104 142 DNA segment DNA Segment, Chr 19, Massachusetts Institute of Technology-138
Tssr157325 19 58759685 to 58759698 13 + TSS region transcription start site region 157325
Tssr157326 19 58759700 to 58759745 45 + TSS region transcription start site region 157326
Pnliprp2 19 58759723 to 58777533 17810 + protein coding gene pancreatic lipase-related protein 2
1700019N19Rik 19 58785803 to 58794414 8611 - protein coding gene RIKEN cDNA 1700019N19 gene
Gm22561 19 58786608 to 58786691 83 - unclassified non-coding RNA gene predicted gene, 22561
Gm17150 19 58790195 to 58790575 380 + pseudogene predicted gene 17150
Tssr159974 19 58792794 to 58792812 18 - TSS region transcription start site region 159974
Tssr159975 19 58792817 to 58792832 15 - TSS region transcription start site region 159975
Tssr159976 19 58793268 to 58793276 8 - TSS region transcription start site region 159976
Tssr159977 19 58793277 to 58793298 21 - TSS region transcription start site region 159977
Tssr159978 19 58793300 to 58793307 7 - TSS region transcription start site region 159978
Tssr159979 19 58794400 to 58794428 28 - TSS region transcription start site region 159979
Tssr159980 19 58794436 to 58794455 19 - TSS region transcription start site region 159980
Gm41877 19 58794515 to 58802121 7606 + lncRNA gene predicted gene, 41877
Hspa12a 19 58795751 to 58860984 65233 - protein coding gene heat shock protein 12A
Cpgi11112 19 58799425 to 58799921 496 CpG island CpG island 11112
Tssr159981 19 58807528 to 58807533 5 - TSS region transcription start site region 159981
Tssr157327 19 58818864 to 58818904 40 + TSS region transcription start site region 157327
Tssr159982 19 58822438 to 58822447 9 - TSS region transcription start site region 159982
Tssr159983 19 58822451 to 58822469 18 - TSS region transcription start site region 159983
Tssr159984 19 58822521 to 58822532 11 - TSS region transcription start site region 159984
Tssr159985 19 58822536 to 58822558 22 - TSS region transcription start site region 159985
Tssr5573 19 58860001 to 58860026 25 + TSS region transcription start site region 5573
Cpgi11113 19 58860676 to 58861405 729 CpG island CpG island 11113
Tssr159986 19 58860948 to 58860970 22 - TSS region transcription start site region 159986
Tssr159987 19 58860975 to 58860997 22 - TSS region transcription start site region 159987
Tssr159988 19 58861013 to 58861022 9 - TSS region transcription start site region 159988
4930433M22Rik 19 58873929 to 58875137 1208 unclassified gene RIKEN cDNA 4930433M22 gene
Mir3086 19 58911673 to 58911759 86 - miRNA gene microRNA 3086
Cpgi11114 19 58943023 to 58944029 1006 CpG island CpG island 11114
Tssr157328 19 58943384 to 58943410 26 + TSS region transcription start site region 157328
Tssr157329 19 58943413 to 58943431 18 + TSS region transcription start site region 157329
Eno4 19 58943425 to 58971421 27996 + protein coding gene enolase 4
Tssr157330 19 58943432 to 58943441 9 + TSS region transcription start site region 157330
Tssr159989 19 58943557 to 58943572 15 - TSS region transcription start site region 159989
Tssr159990 19 58943576 to 58943593 17 - TSS region transcription start site region 159990
Tssr159991 19 58943594 to 58943648 54 - TSS region transcription start site region 159991
Shtn1 19 58973358 to 59076069 102711 - protein coding gene shootin 1
Tssr157331 19 58980118 to 58980127 9 + TSS region transcription start site region 157331
Tssr159992 19 58982935 to 58982949 14 - TSS region transcription start site region 159992
Tssr159993 19 58987984 to 58987999 15 - TSS region transcription start site region 159993
Tssr159994 19 58988059 to 58988068 9 - TSS region transcription start site region 159994
Tssr159995 19 58991711 to 58991737 26 - TSS region transcription start site region 159995