Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:5833495-5863522

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Neat1 19 5824708 to 5845478 20770 - lincRNA gene nuclear paraspeckle assembly transcript 1 (non-protein coding)
Tssr157776 19 5834923 to 5834937 14 - TSS region transcription start site region 157776
Tssr157777 19 5841327 to 5841347 20 - TSS region transcription start site region 157777
Tssr157778 19 5841881 to 5841884 3 - TSS region transcription start site region 157778
Tssr154512 19 5842299 to 5842311 12 + TSS region transcription start site region 154512
Cpgi10483 19 5843925 to 5844357 432 CpG island CpG island 10483
Gm27533 19 5844286 to 5844437 151 - unclassified non-coding RNA gene predicted gene, 27533
Gm27505 19 5844638 to 5844747 109 - unclassified non-coding RNA gene predicted gene, 27505
Gm28006 19 5844916 to 5845037 121 - unclassified non-coding RNA gene predicted gene, 28006
Tssr154513 19 5845112 to 5845140 28 + TSS region transcription start site region 154513
Tssr154514 19 5845279 to 5845362 83 + TSS region transcription start site region 154514
Tssr157779 19 5845471 to 5845485 14 - TSS region transcription start site region 157779
Cpgi10484 19 5845515 to 5846041 526 CpG island CpG island 10484
Frmd8os 19 5845657 to 5851372 5715 + antisense lncRNA gene FERM domain containing 8, opposite strand
Tssr157780 19 5845782 to 5845840 58 - TSS region transcription start site region 157780
Tssr157781 19 5846613 to 5846631 18 - TSS region transcription start site region 157781
Tssr157782 19 5846750 to 5846783 33 - TSS region transcription start site region 157782
Tssr154515 19 5846772 to 5846784 12 + TSS region transcription start site region 154515
Tssr154516 19 5846848 to 5846860 12 + TSS region transcription start site region 154516
Tssr154517 19 5846865 to 5846886 21 + TSS region transcription start site region 154517
Tssr154518 19 5846899 to 5846910 11 + TSS region transcription start site region 154518
Tssr154519 19 5846964 to 5846989 25 + TSS region transcription start site region 154519
Tssr157783 19 5848111 to 5848124 13 - TSS region transcription start site region 157783
Tssr154520 19 5848495 to 5848522 27 + TSS region transcription start site region 154520
Tssr154521 19 5848589 to 5848668 79 + TSS region transcription start site region 154521
Tssr157784 19 5849943 to 5849961 18 - TSS region transcription start site region 157784
Tssr157785 19 5850004 to 5850014 10 - TSS region transcription start site region 157785
Frmd8 19 5850974 to 5875273 24299 - protein coding gene FERM domain containing 8
Tssr157786 19 5856747 to 5856775 28 - TSS region transcription start site region 157786