Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:58246149-58669592

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gfra1 19 58235604 to 58455909 220305 - protein coding gene glial cell line derived neurotrophic factor family receptor alpha 1
Gm46650 19 58280564 to 58294578 14014 - protein coding gene predicted gene, 46650
Gm10007 19 58296204 to 58300348 4144 + lncRNA gene predicted gene 10007
Tssr159937 19 58370398 to 58370401 3 - TSS region transcription start site region 159937
Tssr157253 19 58396193 to 58396201 8 + TSS region transcription start site region 157253
Tssr159938 19 58412164 to 58412167 3 - TSS region transcription start site region 159938
Tssr159939 19 58443582 to 58443588 6 - TSS region transcription start site region 159939
Cpgi11108 19 58453104 to 58456082 2978 CpG island CpG island 11108
Tssr159940 19 58454315 to 58454321 6 - TSS region transcription start site region 159940
Tssr159941 19 58454329 to 58454373 44 - TSS region transcription start site region 159941
Tssr159942 19 58454435 to 58454473 38 - TSS region transcription start site region 159942
Tssr159943 19 58454490 to 58454512 22 - TSS region transcription start site region 159943
Tssr159944 19 58454525 to 58454552 27 - TSS region transcription start site region 159944
Tssr159945 19 58454580 to 58454641 61 - TSS region transcription start site region 159945
Tssr159946 19 58455259 to 58455324 65 - TSS region transcription start site region 159946
Tssr159947 19 58455415 to 58455458 43 - TSS region transcription start site region 159947
Tssr159948 19 58455466 to 58455476 10 - TSS region transcription start site region 159948
Tssr159949 19 58455481 to 58455495 14 - TSS region transcription start site region 159949
Tssr159950 19 58455595 to 58455604 9 - TSS region transcription start site region 159950
Tssr159951 19 58455608 to 58455622 14 - TSS region transcription start site region 159951
Tssr159952 19 58455784 to 58455795 11 - TSS region transcription start site region 159952
Tssr159953 19 58455818 to 58455872 54 - TSS region transcription start site region 159953
Tssr159954 19 58455903 to 58455914 11 - TSS region transcription start site region 159954
Tssr159955 19 58455947 to 58455962 15 - TSS region transcription start site region 159955
Gm41876 19 58456149 to 58459592 3443 + lncRNA gene predicted gene, 41876
Gm33306 19 58500223 to 58508119 7896 + lncRNA gene predicted gene, 33306
Tssr157254 19 58511981 to 58512009 28 + TSS region transcription start site region 157254
Cpgi11109 19 58511996 to 58512212 216 CpG island CpG island 11109
Ccdc172 19 58512002 to 58553085 41083 + protein coding gene coiled-coil domain containing 172
Tssr157255 19 58606324 to 58606333 9 + TSS region transcription start site region 157255
1810007D17Rik 19 58606329 to 58629753 23424 + lincRNA gene RIKEN cDNA 1810007D17 gene
Tssr157256 19 58606361 to 58606370 9 + TSS region transcription start site region 157256
Tssr157257 19 58606377 to 58606382 5 + TSS region transcription start site region 157257
Cpgi11110 19 58622413 to 58622787 374 CpG island CpG island 11110
Tssr5570 19 58650364 to 58650370 6 + TSS region transcription start site region 5570