Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:5806747-5906775

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr154508 19 5808574 to 5808583 9 + TSS region transcription start site region 154508
Tssr154509 19 5812383 to 5812399 16 + TSS region transcription start site region 154509
Tssr154510 19 5815361 to 5815383 22 + TSS region transcription start site region 154510
Cpgi10482 19 5817932 to 5818205 273 CpG island CpG island 10482
Tssr157765 19 5822283 to 5822298 15 - TSS region transcription start site region 157765
Tssr154511 19 5822347 to 5822351 4 + TSS region transcription start site region 154511
Gm27702 19 5824652 to 5824707 55 - unclassified non-coding RNA gene predicted gene, 27702
Neat1 19 5824708 to 5845478 20770 - lincRNA gene nuclear paraspeckle assembly transcript 1 (non-protein coding)
Tssr157766 19 5825981 to 5826007 26 - TSS region transcription start site region 157766
Tssr157767 19 5826671 to 5826746 75 - TSS region transcription start site region 157767
Tssr157768 19 5826767 to 5826788 21 - TSS region transcription start site region 157768
Tssr157769 19 5826829 to 5826840 11 - TSS region transcription start site region 157769
Tssr157770 19 5826919 to 5826929 10 - TSS region transcription start site region 157770
Tssr157771 19 5826959 to 5826971 12 - TSS region transcription start site region 157771
Tssr157772 19 5828165 to 5828267 102 - TSS region transcription start site region 157772
Tssr157773 19 5828296 to 5828311 15 - TSS region transcription start site region 157773
Tssr157774 19 5829769 to 5829783 14 - TSS region transcription start site region 157774
Tssr157775 19 5831253 to 5831420 167 - TSS region transcription start site region 157775
Tssr157776 19 5834923 to 5834937 14 - TSS region transcription start site region 157776
Tssr157777 19 5841327 to 5841347 20 - TSS region transcription start site region 157777
Tssr157778 19 5841881 to 5841884 3 - TSS region transcription start site region 157778
Tssr154512 19 5842299 to 5842311 12 + TSS region transcription start site region 154512
Cpgi10483 19 5843925 to 5844357 432 CpG island CpG island 10483
Gm27533 19 5844286 to 5844437 151 - unclassified non-coding RNA gene predicted gene, 27533
Gm27505 19 5844638 to 5844747 109 - unclassified non-coding RNA gene predicted gene, 27505
Gm28006 19 5844916 to 5845037 121 - unclassified non-coding RNA gene predicted gene, 28006
Tssr154513 19 5845112 to 5845140 28 + TSS region transcription start site region 154513
Tssr154514 19 5845279 to 5845362 83 + TSS region transcription start site region 154514
Tssr157779 19 5845471 to 5845485 14 - TSS region transcription start site region 157779
Cpgi10484 19 5845515 to 5846041 526 CpG island CpG island 10484
Frmd8os 19 5845657 to 5851372 5715 + antisense lncRNA gene FERM domain containing 8, opposite strand
Tssr157780 19 5845782 to 5845840 58 - TSS region transcription start site region 157780
Tssr157781 19 5846613 to 5846631 18 - TSS region transcription start site region 157781
Tssr157782 19 5846750 to 5846783 33 - TSS region transcription start site region 157782
Tssr154515 19 5846772 to 5846784 12 + TSS region transcription start site region 154515
Tssr154516 19 5846848 to 5846860 12 + TSS region transcription start site region 154516
Tssr154517 19 5846865 to 5846886 21 + TSS region transcription start site region 154517
Tssr154518 19 5846899 to 5846910 11 + TSS region transcription start site region 154518
Tssr154519 19 5846964 to 5846989 25 + TSS region transcription start site region 154519
Tssr157783 19 5848111 to 5848124 13 - TSS region transcription start site region 157783
Tssr154520 19 5848495 to 5848522 27 + TSS region transcription start site region 154520
Tssr154521 19 5848589 to 5848668 79 + TSS region transcription start site region 154521
Tssr157784 19 5849943 to 5849961 18 - TSS region transcription start site region 157784
Tssr157785 19 5850004 to 5850014 10 - TSS region transcription start site region 157785
Frmd8 19 5850974 to 5875273 24299 - protein coding gene FERM domain containing 8
Tssr157786 19 5856747 to 5856775 28 - TSS region transcription start site region 157786
Cpgi10485 19 5874751 to 5875500 749 CpG island CpG island 10485
Tssr157787 19 5874974 to 5874993 19 - TSS region transcription start site region 157787
Tssr157788 19 5875210 to 5875264 54 - TSS region transcription start site region 157788
Tssr157789 19 5875268 to 5875279 11 - TSS region transcription start site region 157789
Tssr154522 19 5877794 to 5877840 46 + TSS region transcription start site region 154522
Slc25a45 19 5877808 to 5885766 7958 + protein coding gene solute carrier family 25, member 45
Tssr154523 19 5877853 to 5877870 17 + TSS region transcription start site region 154523
Tssr154524 19 5877874 to 5877885 11 + TSS region transcription start site region 154524
Tssr154525 19 5877899 to 5877914 15 + TSS region transcription start site region 154525
Tssr154526 19 5878132 to 5878162 30 + TSS region transcription start site region 154526
Tssr154527 19 5878590 to 5878611 21 + TSS region transcription start site region 154527
Tssr154528 19 5878622 to 5878644 22 + TSS region transcription start site region 154528
Tssr154529 19 5884746 to 5884792 46 + TSS region transcription start site region 154529
Tigd3 19 5891139 to 5894107 2968 - protein coding gene tigger transposable element derived 3
Cpgi10486 19 5893539 to 5894379 840 CpG island CpG island 10486
Tssr157790 19 5894070 to 5894097 27 - TSS region transcription start site region 157790
Tssr157791 19 5894100 to 5894155 55 - TSS region transcription start site region 157791
Dpf2 19 5896516 to 5912871 16355 - protein coding gene D4, zinc and double PHD fingers family 2
Tssr157792 19 5898204 to 5898216 12 - TSS region transcription start site region 157792
Tssr157793 19 5902664 to 5902694 30 - TSS region transcription start site region 157793
Tssr157794 19 5905489 to 5905525 36 - TSS region transcription start site region 157794