Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:5800361-5830383

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Malat1 19 5795690 to 5802671 6981 - lincRNA gene metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
Tssr157728 19 5800402 to 5800412 10 - TSS region transcription start site region 157728
Tssr157729 19 5800601 to 5800612 11 - TSS region transcription start site region 157729
Tssr157730 19 5800731 to 5800741 10 - TSS region transcription start site region 157730
Tssr157731 19 5800754 to 5800766 12 - TSS region transcription start site region 157731
Tssr157732 19 5800797 to 5800802 5 - TSS region transcription start site region 157732
Tssr157733 19 5800834 to 5800845 11 - TSS region transcription start site region 157733
Tssr157734 19 5800851 to 5800857 6 - TSS region transcription start site region 157734
Tssr157735 19 5800875 to 5800884 9 - TSS region transcription start site region 157735
Tssr157736 19 5800913 to 5800921 8 - TSS region transcription start site region 157736
Tssr157737 19 5800969 to 5800974 5 - TSS region transcription start site region 157737
Cpgi10480 19 5800981 to 5801215 234 CpG island CpG island 10480
Tssr154496 19 5800993 to 5801121 128 + TSS region transcription start site region 154496
Tssr157738 19 5801000 to 5801010 10 - TSS region transcription start site region 157738
Tssr157739 19 5801037 to 5801048 11 - TSS region transcription start site region 157739
Tssr157740 19 5801059 to 5801064 5 - TSS region transcription start site region 157740
Tssr157741 19 5801071 to 5801074 3 - TSS region transcription start site region 157741
Tssr157742 19 5801115 to 5801126 11 - TSS region transcription start site region 157742
Tssr154497 19 5801122 to 5801222 100 + TSS region transcription start site region 154497
Tssr157743 19 5801143 to 5801158 15 - TSS region transcription start site region 157743
Tssr157744 19 5801217 to 5801233 16 - TSS region transcription start site region 157744
Tssr157745 19 5801241 to 5801272 31 - TSS region transcription start site region 157745
Tssr157746 19 5801299 to 5801301 2 - TSS region transcription start site region 157746
Tssr157747 19 5801322 to 5801327 5 - TSS region transcription start site region 157747
Tssr157748 19 5801340 to 5801347 7 - TSS region transcription start site region 157748
Tssr157749 19 5801348 to 5801349 1 - TSS region transcription start site region 157749
Tssr157750 19 5801353 to 5801365 12 - TSS region transcription start site region 157750
Tssr157751 19 5801374 to 5801386 12 - TSS region transcription start site region 157751
Tssr157752 19 5801389 to 5801474 85 - TSS region transcription start site region 157752
Tssr157753 19 5801476 to 5801531 55 - TSS region transcription start site region 157753
Tssr157754 19 5801532 to 5801559 27 - TSS region transcription start site region 157754
Tssr157755 19 5801565 to 5801597 32 - TSS region transcription start site region 157755
Tssr157756 19 5801598 to 5801678 80 - TSS region transcription start site region 157756
Tssr157757 19 5801684 to 5801706 22 - TSS region transcription start site region 157757
Tssr157758 19 5801715 to 5801732 17 - TSS region transcription start site region 157758
Tssr157759 19 5801735 to 5801771 36 - TSS region transcription start site region 157759
Tssr154498 19 5801770 to 5801779 9 + TSS region transcription start site region 154498
Tssr157760 19 5801798 to 5801998 200 - TSS region transcription start site region 157760
Tssr154499 19 5801851 to 5801876 25 + TSS region transcription start site region 154499
Tssr154500 19 5801887 to 5801923 36 + TSS region transcription start site region 154500
Tssr154501 19 5801933 to 5801946 13 + TSS region transcription start site region 154501
Gm37376 19 5801941 to 5802393 452 + unclassified gene predicted gene, 37376
Tssr154502 19 5802103 to 5802137 34 + TSS region transcription start site region 154502
Tssr154503 19 5802184 to 5802207 23 + TSS region transcription start site region 154503
Tssr154504 19 5802349 to 5802404 55 + TSS region transcription start site region 154504
Tssr154505 19 5802408 to 5802433 25 + TSS region transcription start site region 154505
Tssr157761 19 5802667 to 5802675 8 - TSS region transcription start site region 157761
Tssr154506 19 5802809 to 5802814 5 + TSS region transcription start site region 154506
Cpgi10481 19 5803052 to 5804172 1120 CpG island CpG island 10481
Tssr157762 19 5803505 to 5803521 16 - TSS region transcription start site region 157762
Tssr157763 19 5803571 to 5803582 11 - TSS region transcription start site region 157763
Tssr154507 19 5803741 to 5803795 54 + TSS region transcription start site region 154507
Tssr157764 19 5806500 to 5806513 13 - TSS region transcription start site region 157764
Tssr154508 19 5808574 to 5808583 9 + TSS region transcription start site region 154508
Tssr154509 19 5812383 to 5812399 16 + TSS region transcription start site region 154509
Tssr154510 19 5815361 to 5815383 22 + TSS region transcription start site region 154510
Cpgi10482 19 5817932 to 5818205 273 CpG island CpG island 10482
Tssr157765 19 5822283 to 5822298 15 - TSS region transcription start site region 157765
Tssr154511 19 5822347 to 5822351 4 + TSS region transcription start site region 154511
Gm27702 19 5824652 to 5824707 55 - unclassified non-coding RNA gene predicted gene, 27702
Neat1 19 5824708 to 5845478 20770 - lincRNA gene nuclear paraspeckle assembly transcript 1 (non-protein coding)
Tssr157766 19 5825981 to 5826007 26 - TSS region transcription start site region 157766
Tssr157767 19 5826671 to 5826746 75 - TSS region transcription start site region 157767
Tssr157768 19 5826767 to 5826788 21 - TSS region transcription start site region 157768
Tssr157769 19 5826829 to 5826840 11 - TSS region transcription start site region 157769
Tssr157770 19 5826919 to 5826929 10 - TSS region transcription start site region 157770
Tssr157771 19 5826959 to 5826971 12 - TSS region transcription start site region 157771
Tssr157772 19 5828165 to 5828267 102 - TSS region transcription start site region 157772
Tssr157773 19 5828296 to 5828311 15 - TSS region transcription start site region 157773
Tssr157774 19 5829769 to 5829783 14 - TSS region transcription start site region 157774