MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 19:57488961-57828969

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Trub1	19	57452906 to 57491005	38099	+	protein coding gene	TruB pseudouridine (psi) synthase family member 1
6720468P15Rik	19	57508564 to 57512788	4224	+	lncRNA gene	RIKEN cDNA 6720468P15 gene
Tssr157239	19	57508582 to 57508597	15	+	TSS region	transcription start site region 157239
Gm32932	19	57522180 to 57531160	8980	+	lncRNA gene	predicted gene, 32932
Cpgi11106	19	57610120 to 57611891	1771		CpG island	CpG island 11106
Tssr157240	19	57610945 to 57610963	18	+	TSS region	transcription start site region 157240
Tssr157241	19	57611020 to 57611079	59	+	TSS region	transcription start site region 157241
Atrnl1	19	57611034 to 58133338	522304	+	protein coding gene	attractin like 1
Tssr157242	19	57646261 to 57646266	5	+	TSS region	transcription start site region 157242
Tssr157243	19	57658961 to 57658969	8	+	TSS region	transcription start site region 157243
Tssr159935	19	57668089 to 57668108	19	-	TSS region	transcription start site region 159935
Tssr157244	19	57691366 to 57691372	6	+	TSS region	transcription start site region 157244
Tssr5567	19	57698181 to 57698183	2	+	TSS region	transcription start site region 5567
Tssr157245	19	57747600 to 57747613	13	+	TSS region	transcription start site region 157245
Cpgi11107	19	57756250 to 57756442	192		CpG island	CpG island 11107
Eosnp3	19	57757132 to 57757132	0		QTL	percent eosinophils 3
Tssr157246	19	57780568 to 57780572	4	+	TSS region	transcription start site region 157246
Tssr157247	19	57804671 to 57804677	6	+	TSS region	transcription start site region 157247