MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 19:5724618-5734700

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ehbp1l1	19	5707376 to 5726317	18941	-	protein coding gene	EH domain binding protein 1-like 1
Tssr154481	19	5724812 to 5724829	17	+	TSS region	transcription start site region 154481
Tssr154482	19	5724874 to 5724886	12	+	TSS region	transcription start site region 154482
Cpgi10472	19	5725953 to 5726559	606		CpG island	CpG island 10472
Tssr157633	19	5726214 to 5726227	13	-	TSS region	transcription start site region 157633
Tssr157634	19	5726240 to 5726287	47	-	TSS region	transcription start site region 157634
Tssr154483	19	5727170 to 5727194	24	+	TSS region	transcription start site region 154483
Gm16538	19	5727206 to 5731627	4421	+	antisense lncRNA gene	predicted gene 16538
Tssr154484	19	5727211 to 5727225	14	+	TSS region	transcription start site region 154484
Fam89b	19	5728087 to 5729653	1566	-	protein coding gene	family with sequence similarity 89, member B
Cpgi10473	19	5729070 to 5730020	950		CpG island	CpG island 10473
Tssr157635	19	5729357 to 5729416	59	-	TSS region	transcription start site region 157635
Tssr157636	19	5729512 to 5729530	18	-	TSS region	transcription start site region 157636
Tssr157637	19	5729618 to 5729700	82	-	TSS region	transcription start site region 157637
Sssca1	19	5730306 to 5731732	1426	-	protein coding gene	Sjogren syndrome/scleroderma autoantigen 1
Cpgi10474	19	5731141 to 5731938	797		CpG island	CpG island 10474
Tssr157638	19	5731489 to 5731503	14	-	TSS region	transcription start site region 157638
Tssr157639	19	5731697 to 5731733	36	-	TSS region	transcription start site region 157639