Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:56792825-57223785

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccdc186 19 56787481 to 56822190 34709 - protein coding gene coiled-coil domain containing 186
1700010L13Rik 19 56815352 to 56822538 7186 protein coding gene RIKEN cDNA 1700010L13 gene
Tssr159882 19 56815768 to 56815777 9 - TSS region transcription start site region 159882
Tssr159883 19 56815784 to 56815798 14 - TSS region transcription start site region 159883
Tssr159884 19 56815800 to 56815810 10 - TSS region transcription start site region 159884
Tssr159885 19 56815818 to 56815820 2 - TSS region transcription start site region 159885
Cpgi11092 19 56821637 to 56822625 988 CpG island CpG island 11092
Tssr157215 19 56821928 to 56821964 36 + TSS region transcription start site region 157215
Tssr159886 19 56822080 to 56822087 7 - TSS region transcription start site region 159886
Tssr159887 19 56822161 to 56822220 59 - TSS region transcription start site region 159887
Cpgi11093 19 56826110 to 56826636 526 CpG island CpG island 11093
Tssr157216 19 56826202 to 56826248 46 + TSS region transcription start site region 157216
Tdrd1 19 56826209 to 56870012 43803 + protein coding gene tudor domain containing 1
Tssr157217 19 56826268 to 56826288 20 + TSS region transcription start site region 157217
Tssr157218 19 56826504 to 56826513 9 + TSS region transcription start site region 157218
Tssr157219 19 56851944 to 56851954 10 + TSS region transcription start site region 157219
Cpgi11094 19 56873870 to 56875034 1164 CpG island CpG island 11094
Tssr157220 19 56874041 to 56874058 17 + TSS region transcription start site region 157220
Tssr157221 19 56874403 to 56874474 71 + TSS region transcription start site region 157221
Vwa2 19 56874416 to 56912078 37662 + protein coding gene von Willebrand factor A domain containing 2
Tssr157222 19 56897846 to 56897858 12 + TSS region transcription start site region 157222
Tssr157223 19 56897868 to 56897875 7 + TSS region transcription start site region 157223
Afap1l2 19 56912361 to 57008228 95867 - protein coding gene actin filament associated protein 1-like 2
Tssr159888 19 56952003 to 56952020 17 - TSS region transcription start site region 159888
Tssr159889 19 56952148 to 56952151 3 - TSS region transcription start site region 159889
Tssr159890 19 56964861 to 56964864 3 - TSS region transcription start site region 159890
Gm38597 19 56977200 to 56984849 7649 + lncRNA gene predicted gene, 38597
Cpgi11095 19 57007825 to 57008785 960 CpG island CpG island 11095
Tssr159891 19 57008177 to 57008184 7 - TSS region transcription start site region 159891
Tssr159892 19 57008187 to 57008223 36 - TSS region transcription start site region 159892
Tssr159893 19 57008546 to 57008560 14 - TSS region transcription start site region 159893
Tssr159894 19 57008569 to 57008580 11 - TSS region transcription start site region 159894
Tssr159895 19 57008598 to 57008607 9 - TSS region transcription start site region 159895
Ablim1 19 57033264 to 57315204 281940 - protein coding gene actin-binding LIM protein 1
Tssr159896 19 57045084 to 57045086 2 - TSS region transcription start site region 159896
Tssr159897 19 57045739 to 57045743 4 - TSS region transcription start site region 159897
D19Dcr65 19 57052377 to 57052472 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 65
Tssr159898 19 57079689 to 57079691 2 - TSS region transcription start site region 159898
Tssr157224 19 57117404 to 57117421 17 + TSS region transcription start site region 157224
Tssr159899 19 57118807 to 57118814 7 - TSS region transcription start site region 159899
Tssr159900 19 57118856 to 57118868 12 - TSS region transcription start site region 159900
Tssr159901 19 57118876 to 57118896 20 - TSS region transcription start site region 159901
Tssr159902 19 57118897 to 57118979 82 - TSS region transcription start site region 159902
Tssr159903 19 57118981 to 57119026 45 - TSS region transcription start site region 159903
Tssr157225 19 57119108 to 57119122 14 + TSS region transcription start site region 157225
Cpgi11096 19 57119389 to 57119645 256 CpG island CpG island 11096
D19Mit105 19 57129061 to 57129150 89 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 105
Tssr159904 19 57131354 to 57131359 5 - TSS region transcription start site region 159904
Tssr157226 19 57131699 to 57131735 36 + TSS region transcription start site region 157226
Tssr159905 19 57134643 to 57134656 13 - TSS region transcription start site region 159905
Tssr159906 19 57134786 to 57134821 35 - TSS region transcription start site region 159906
Tssr159907 19 57134991 to 57135006 15 - TSS region transcription start site region 159907
Tssr159908 19 57155414 to 57155461 47 - TSS region transcription start site region 159908
Tssr159909 19 57165816 to 57165818 2 - TSS region transcription start site region 159909
Tssr159910 19 57178539 to 57178541 2 - TSS region transcription start site region 159910
Tssr159911 19 57182293 to 57182315 22 - TSS region transcription start site region 159911
Tssr159912 19 57182318 to 57182354 36 - TSS region transcription start site region 159912
Cpgi11097 19 57197321 to 57197728 407 CpG island CpG island 11097
Tssr159913 19 57197350 to 57197366 16 - TSS region transcription start site region 159913
Tssr159914 19 57197377 to 57197417 40 - TSS region transcription start site region 159914
Tssr159915 19 57197435 to 57197460 25 - TSS region transcription start site region 159915
Tssr159916 19 57197516 to 57197536 20 - TSS region transcription start site region 159916
Tssr159917 19 57197556 to 57197567 11 - TSS region transcription start site region 159917
Tssr157227 19 57216155 to 57216165 10 + TSS region transcription start site region 157227