Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:56460680-56560691

23 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr157191	19	56461565 to 56461572	7	+	TSS region	transcription start site region 157191
Tssr157192	19	56461617 to 56461628	11	+	TSS region	transcription start site region 157192
Tssr157193	19	56461629 to 56461646	17	+	TSS region	transcription start site region 157193
Plekhs1	19	56461640 to 56486752	25112	+	protein coding gene	pleckstrin homology domain containing, family S member 1
Tssr157194	19	56461654 to 56461668	14	+	TSS region	transcription start site region 157194
Cpgi11089	19	56474534 to 56475114	580		CpG island	CpG island 11089
Tssr157195	19	56477724 to 56477731	7	+	TSS region	transcription start site region 157195
Tssr157196	19	56510562 to 56510618	56	+	TSS region	transcription start site region 157196
Tssr157197	19	56510680 to 56510691	11	+	TSS region	transcription start site region 157197
Dclre1a	19	56529167 to 56548222	19055	-	protein coding gene	DNA cross-link repair 1A
Tssr5565	19	56535167 to 56535178	11	-	TSS region	transcription start site region 5565
Tssr159870	19	56544626 to 56544672	46	-	TSS region	transcription start site region 159870
Tssr159871	19	56548013 to 56548046	33	-	TSS region	transcription start site region 159871
Tssr159872	19	56548122 to 56548127	5	-	TSS region	transcription start site region 159872
Cpgi11090	19	56548212 to 56549107	895		CpG island	CpG island 11090
Tssr159873	19	56548214 to 56548264	50	-	TSS region	transcription start site region 159873
Tssr157198	19	56548254 to 56548283	29	+	TSS region	transcription start site region 157198
Nhlrc2	19	56548261 to 56598846	50585	+	protein coding gene	NHL repeat containing 2
Tssr157199	19	56548435 to 56548512	77	+	TSS region	transcription start site region 157199
Tssr157200	19	56548518 to 56548543	25	+	TSS region	transcription start site region 157200
Tssr157201	19	56548553 to 56548572	19	+	TSS region	transcription start site region 157201
Tssr157202	19	56548579 to 56548623	44	+	TSS region	transcription start site region 157202
Tssr157203	19	56548632 to 56548684	52	+	TSS region	transcription start site region 157203