MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 19:56411191-56471205

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Casp7	19	56397129 to 56442344	45215	+	protein coding gene	caspase 7
Tssr157184	19	56417136 to 56417158	22	+	TSS region	transcription start site region 157184
Tssr159868	19	56420498 to 56420503	5	-	TSS region	transcription start site region 159868
Tssr159869	19	56424591 to 56424592	1	-	TSS region	transcription start site region 159869
Tssr5564	19	56424643 to 56424660	17	-	TSS region	transcription start site region 5564
Tssr157185	19	56425683 to 56425694	11	+	TSS region	transcription start site region 157185
Tssr157186	19	56425716 to 56425742	26	+	TSS region	transcription start site region 157186
Tssr157187	19	56425756 to 56425771	15	+	TSS region	transcription start site region 157187
Tssr157188	19	56436681 to 56436712	31	+	TSS region	transcription start site region 157188
Tssr157189	19	56441191 to 56441205	14	+	TSS region	transcription start site region 157189
Tssr157190	19	56441229 to 56441238	9	+	TSS region	transcription start site region 157190
Gm46657	19	56442446 to 56455000	12554	-	lncRNA gene	predicted gene, 46657
Tssr157191	19	56461565 to 56461572	7	+	TSS region	transcription start site region 157191
Tssr157192	19	56461617 to 56461628	11	+	TSS region	transcription start site region 157192
Tssr157193	19	56461629 to 56461646	17	+	TSS region	transcription start site region 157193
Plekhs1	19	56461640 to 56486752	25112	+	protein coding gene	pleckstrin homology domain containing, family S member 1
Tssr157194	19	56461654 to 56461668	14	+	TSS region	transcription start site region 157194