Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:5640717-6590726

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604 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rela 19 5637483 to 5648130 10647 + protein coding gene v-rel reticuloendotheliosis viral oncogene homolog A (avian)
Tssr154473 19 5645536 to 5645550 14 + TSS region transcription start site region 154473
Tssr154474 19 5646850 to 5646860 10 + TSS region transcription start site region 154474
Cpgi10464 19 5648794 to 5649081 287 CpG island CpG island 10464
Sipa1 19 5651185 to 5663707 12522 - protein coding gene signal-induced proliferation associated gene 1
Cpgi10465 19 5653988 to 5655453 1465 CpG island CpG island 10465
Tssr157620 19 5654262 to 5654304 42 - TSS region transcription start site region 157620
Tssr157621 19 5658246 to 5658251 5 - TSS region transcription start site region 157621
Cpgi10466 19 5660735 to 5660933 198 CpG island CpG island 10466
Tssr157622 19 5661625 to 5661662 37 - TSS region transcription start site region 157622
Cpgi10467 19 5663403 to 5663837 434 CpG island CpG island 10467
Tssr157623 19 5663635 to 5663670 35 - TSS region transcription start site region 157623
Tssr157624 19 5663674 to 5663694 20 - TSS region transcription start site region 157624
Tssr157625 19 5663701 to 5663710 9 - TSS region transcription start site region 157625
Pcnx3 19 5664635 to 5688908 24273 - protein coding gene pecanex homolog 3
Mir6987 19 5679004 to 5679076 72 - miRNA gene microRNA 6987
Cpgi10468 19 5688045 to 5689083 1038 CpG island CpG island 10468
Tssr157626 19 5688540 to 5688590 50 - TSS region transcription start site region 157626
Tssr157627 19 5688614 to 5688706 92 - TSS region transcription start site region 157627
Tssr154475 19 5688723 to 5688770 47 + TSS region transcription start site region 154475
Tssr154476 19 5688778 to 5688797 19 + TSS region transcription start site region 154476
Map3k11 19 5689131 to 5702862 13731 + protein coding gene mitogen-activated protein kinase kinase kinase 11
Cpgi10469 19 5689487 to 5690707 1220 CpG island CpG island 10469
Tssr154477 19 5689745 to 5689823 78 + TSS region transcription start site region 154477
Tssr154478 19 5692852 to 5692874 22 + TSS region transcription start site region 154478
Cpgi10470 19 5695503 to 5696337 834 CpG island CpG island 10470
Tssr154479 19 5700770 to 5700795 25 + TSS region transcription start site region 154479
Kcnk7 19 5704367 to 5707101 2734 + protein coding gene potassium channel, subfamily K, member 7
Tssr154480 19 5704437 to 5704468 31 + TSS region transcription start site region 154480
Ehbp1l1 19 5707376 to 5726317 18941 - protein coding gene EH domain binding protein 1-like 1
Cpgi10471 19 5715883 to 5716530 647 CpG island CpG island 10471
Tssr157628 19 5719306 to 5719315 9 - TSS region transcription start site region 157628
Tssr157629 19 5720297 to 5720311 14 - TSS region transcription start site region 157629
Tssr157630 19 5720681 to 5720690 9 - TSS region transcription start site region 157630
Tssr157631 19 5720695 to 5720725 30 - TSS region transcription start site region 157631
Tssr157632 19 5721811 to 5721853 42 - TSS region transcription start site region 157632
Tssr154481 19 5724812 to 5724829 17 + TSS region transcription start site region 154481
Tssr154482 19 5724874 to 5724886 12 + TSS region transcription start site region 154482
Cpgi10472 19 5725953 to 5726559 606 CpG island CpG island 10472
Tssr157633 19 5726214 to 5726227 13 - TSS region transcription start site region 157633
Tssr157634 19 5726240 to 5726287 47 - TSS region transcription start site region 157634
Tssr154483 19 5727170 to 5727194 24 + TSS region transcription start site region 154483
Gm16538 19 5727206 to 5731627 4421 + antisense lncRNA gene predicted gene 16538
Tssr154484 19 5727211 to 5727225 14 + TSS region transcription start site region 154484
Fam89b 19 5728087 to 5729653 1566 - protein coding gene family with sequence similarity 89, member B
Cpgi10473 19 5729070 to 5730020 950 CpG island CpG island 10473
Tssr157635 19 5729357 to 5729416 59 - TSS region transcription start site region 157635
Tssr157636 19 5729512 to 5729530 18 - TSS region transcription start site region 157636
Tssr157637 19 5729618 to 5729700 82 - TSS region transcription start site region 157637
Sssca1 19 5730306 to 5731732 1426 - protein coding gene Sjogren syndrome/scleroderma autoantigen 1
Cpgi10474 19 5731141 to 5731938 797 CpG island CpG island 10474
Tssr157638 19 5731489 to 5731503 14 - TSS region transcription start site region 157638
Tssr157639 19 5731697 to 5731733 36 - TSS region transcription start site region 157639
Tssr154485 19 5740885 to 5740904 19 + TSS region transcription start site region 154485
Ltbp3 19 5740904 to 5758532 17628 + protein coding gene latent transforming growth factor beta binding protein 3
Tssr154486 19 5741300 to 5741325 25 + TSS region transcription start site region 154486
Cpgi10475 19 5741483 to 5742728 1245 CpG island CpG island 10475
Tssr154487 19 5741681 to 5741701 20 + TSS region transcription start site region 154487
Tssr154488 19 5741707 to 5741729 22 + TSS region transcription start site region 154488
Tssr154489 19 5741859 to 5741887 28 + TSS region transcription start site region 154489
Tssr154490 19 5741892 to 5741902 10 + TSS region transcription start site region 154490
Tssr154491 19 5741959 to 5742015 56 + TSS region transcription start site region 154491
Tssr154492 19 5742019 to 5742036 17 + TSS region transcription start site region 154492
Tssr154493 19 5742080 to 5742085 5 + TSS region transcription start site region 154493
Tssr154494 19 5742460 to 5742472 12 + TSS region transcription start site region 154494
Cpgi10476 19 5745487 to 5746118 631 CpG island CpG island 10476
Tssr154495 19 5747743 to 5747753 10 + TSS region transcription start site region 154495
Cpgi10477 19 5751102 to 5752126 1024 CpG island CpG island 10477
Cpgi10478 19 5756613 to 5758217 1604 CpG island CpG island 10478
Scyl1 19 5758427 to 5771401 12974 - protein coding gene SCY1-like 1 (S. cerevisiae)
ocd 19 5758427 to 9933333 4174906 heritable phenotypic marker osteochondrodystrophy
Cpgi10479 19 5770502 to 5771572 1070 CpG island CpG island 10479
Tssr157640 19 5771270 to 5771301 31 - TSS region transcription start site region 157640
Tssr157641 19 5771343 to 5771371 28 - TSS region transcription start site region 157641
Tssr157642 19 5771376 to 5771408 32 - TSS region transcription start site region 157642
Tssr157643 19 5771412 to 5771423 11 - TSS region transcription start site region 157643
Tssr157644 19 5771618 to 5771640 22 - TSS region transcription start site region 157644
Malat1 19 5795690 to 5802671 6981 - lincRNA gene metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
Tssr157645 19 5796353 to 5796381 28 - TSS region transcription start site region 157645
Tssr157646 19 5796383 to 5796483 100 - TSS region transcription start site region 157646
Tssr157647 19 5796545 to 5796570 25 - TSS region transcription start site region 157647
Tssr157648 19 5796711 to 5796737 26 - TSS region transcription start site region 157648
Tssr157649 19 5796811 to 5796829 18 - TSS region transcription start site region 157649
Tssr5415 19 5796834 to 5796866 32 - TSS region transcription start site region 5415
Tssr157650 19 5796870 to 5796894 24 - TSS region transcription start site region 157650
Tssr157651 19 5796924 to 5796964 40 - TSS region transcription start site region 157651
Tssr157652 19 5797061 to 5797104 43 - TSS region transcription start site region 157652
Tssr157653 19 5797178 to 5797188 10 - TSS region transcription start site region 157653
Tssr157654 19 5797221 to 5797242 21 - TSS region transcription start site region 157654
Tssr157655 19 5797258 to 5797268 10 - TSS region transcription start site region 157655
Tssr157656 19 5797288 to 5797301 13 - TSS region transcription start site region 157656
Tssr5416 19 5797310 to 5797315 5 - TSS region transcription start site region 5416
Tssr157657 19 5797410 to 5797421 11 - TSS region transcription start site region 157657
Tssr157658 19 5797462 to 5797527 65 - TSS region transcription start site region 157658
Gm20417 19 5797562 to 5798549 987 + unclassified non-coding RNA gene predicted gene 20417
Tssr157659 19 5797565 to 5797631 66 - TSS region transcription start site region 157659
Tssr157660 19 5797718 to 5797727 9 - TSS region transcription start site region 157660
Tssr157661 19 5797739 to 5797760 21 - TSS region transcription start site region 157661
Tssr157662 19 5797844 to 5797853 9 - TSS region transcription start site region 157662
Tssr157663 19 5797903 to 5797914 11 - TSS region transcription start site region 157663
Tssr157664 19 5798025 to 5798028 3 - TSS region transcription start site region 157664
Tssr157665 19 5798032 to 5798037 5 - TSS region transcription start site region 157665
Tssr157666 19 5798057 to 5798069 12 - TSS region transcription start site region 157666
Tssr157667 19 5798310 to 5798323 13 - TSS region transcription start site region 157667
Tssr157668 19 5798357 to 5798364 7 - TSS region transcription start site region 157668
Tssr157669 19 5798372 to 5798383 11 - TSS region transcription start site region 157669
Tssr157670 19 5798392 to 5798399 7 - TSS region transcription start site region 157670
Tssr157671 19 5798409 to 5798420 11 - TSS region transcription start site region 157671
Tssr157672 19 5798458 to 5798470 12 - TSS region transcription start site region 157672
Tssr157673 19 5798475 to 5798504 29 - TSS region transcription start site region 157673
Tssr157674 19 5798505 to 5798516 11 - TSS region transcription start site region 157674
Tssr157675 19 5798524 to 5798529 5 - TSS region transcription start site region 157675
Tssr157676 19 5798535 to 5798544 9 - TSS region transcription start site region 157676
Tssr157677 19 5798557 to 5798566 9 - TSS region transcription start site region 157677
Tssr157678 19 5798569 to 5798580 11 - TSS region transcription start site region 157678
Tssr157679 19 5798606 to 5798648 42 - TSS region transcription start site region 157679
Tssr157680 19 5798661 to 5798675 14 - TSS region transcription start site region 157680
Tssr157681 19 5798690 to 5798696 6 - TSS region transcription start site region 157681
Tssr157682 19 5798708 to 5798709 1 - TSS region transcription start site region 157682
Tssr157683 19 5798734 to 5798745 11 - TSS region transcription start site region 157683
Tssr157684 19 5798750 to 5798755 5 - TSS region transcription start site region 157684
Tssr157685 19 5798760 to 5798770 10 - TSS region transcription start site region 157685
Tssr157686 19 5798775 to 5798831 56 - TSS region transcription start site region 157686
Tssr157687 19 5798844 to 5798852 8 - TSS region transcription start site region 157687
Tssr157688 19 5798894 to 5798899 5 - TSS region transcription start site region 157688
Tssr157689 19 5798925 to 5798936 11 - TSS region transcription start site region 157689
Gm27694 19 5799000 to 5799085 85 - unclassified non-coding RNA gene predicted gene, 27694
Tssr157690 19 5799003 to 5799008 5 - TSS region transcription start site region 157690
Tssr5417 19 5799026 to 5799030 4 - TSS region transcription start site region 5417
Tssr157691 19 5799049 to 5799056 7 - TSS region transcription start site region 157691
Tssr157692 19 5799103 to 5799137 34 - TSS region transcription start site region 157692
Tssr157693 19 5799160 to 5799167 7 - TSS region transcription start site region 157693
Tssr157694 19 5799218 to 5799230 12 - TSS region transcription start site region 157694
Tssr157695 19 5799282 to 5799293 11 - TSS region transcription start site region 157695
Tssr157696 19 5799303 to 5799310 7 - TSS region transcription start site region 157696
Tssr157697 19 5799352 to 5799366 14 - TSS region transcription start site region 157697
Tssr157698 19 5799368 to 5799382 14 - TSS region transcription start site region 157698
Tssr157699 19 5799426 to 5799442 16 - TSS region transcription start site region 157699
Tssr157700 19 5799475 to 5799486 11 - TSS region transcription start site region 157700
Tssr157701 19 5799493 to 5799500 7 - TSS region transcription start site region 157701
Tssr5418 19 5799509 to 5799511 2 - TSS region transcription start site region 5418
Tssr157702 19 5799529 to 5799536 7 - TSS region transcription start site region 157702
Tssr157703 19 5799580 to 5799594 14 - TSS region transcription start site region 157703
Tssr157704 19 5799606 to 5799615 9 - TSS region transcription start site region 157704
Tssr157705 19 5799627 to 5799645 18 - TSS region transcription start site region 157705
Tssr157706 19 5799675 to 5799690 15 - TSS region transcription start site region 157706
Tssr157707 19 5799721 to 5799726 5 - TSS region transcription start site region 157707
Tssr157708 19 5799731 to 5799738 7 - TSS region transcription start site region 157708
Tssr157709 19 5799743 to 5799756 13 - TSS region transcription start site region 157709
Tssr157710 19 5799762 to 5799774 12 - TSS region transcription start site region 157710
Tssr157711 19 5799781 to 5799796 15 - TSS region transcription start site region 157711
Tssr157712 19 5799818 to 5799829 11 - TSS region transcription start site region 157712
Tssr157713 19 5799845 to 5799856 11 - TSS region transcription start site region 157713
Tssr157714 19 5799896 to 5799912 16 - TSS region transcription start site region 157714
Tssr157715 19 5799913 to 5799924 11 - TSS region transcription start site region 157715
Tssr157716 19 5799957 to 5799968 11 - TSS region transcription start site region 157716
Tssr157717 19 5799984 to 5800002 18 - TSS region transcription start site region 157717
Tssr157718 19 5800029 to 5800043 14 - TSS region transcription start site region 157718
Tssr157719 19 5800083 to 5800092 9 - TSS region transcription start site region 157719
Tssr157720 19 5800102 to 5800114 12 - TSS region transcription start site region 157720
Tssr157721 19 5800138 to 5800149 11 - TSS region transcription start site region 157721
Tssr157722 19 5800155 to 5800162 7 - TSS region transcription start site region 157722
Tssr5419 19 5800163 to 5800173 10 - TSS region transcription start site region 5419
Tssr5420 19 5800180 to 5800187 7 - TSS region transcription start site region 5420
Tssr157723 19 5800230 to 5800233 3 - TSS region transcription start site region 157723
Tssr157724 19 5800239 to 5800245 6 - TSS region transcription start site region 157724
Tssr157725 19 5800285 to 5800288 3 - TSS region transcription start site region 157725
Tssr157726 19 5800290 to 5800301 11 - TSS region transcription start site region 157726
Tssr157727 19 5800305 to 5800319 14 - TSS region transcription start site region 157727
Tssr157728 19 5800402 to 5800412 10 - TSS region transcription start site region 157728
Tssr157729 19 5800601 to 5800612 11 - TSS region transcription start site region 157729
Tssr157730 19 5800731 to 5800741 10 - TSS region transcription start site region 157730
Tssr157731 19 5800754 to 5800766 12 - TSS region transcription start site region 157731
Tssr157732 19 5800797 to 5800802 5 - TSS region transcription start site region 157732
Tssr157733 19 5800834 to 5800845 11 - TSS region transcription start site region 157733
Tssr157734 19 5800851 to 5800857 6 - TSS region transcription start site region 157734
Tssr157735 19 5800875 to 5800884 9 - TSS region transcription start site region 157735
Tssr157736 19 5800913 to 5800921 8 - TSS region transcription start site region 157736
Tssr157737 19 5800969 to 5800974 5 - TSS region transcription start site region 157737
Cpgi10480 19 5800981 to 5801215 234 CpG island CpG island 10480
Tssr154496 19 5800993 to 5801121 128 + TSS region transcription start site region 154496
Tssr157738 19 5801000 to 5801010 10 - TSS region transcription start site region 157738
Tssr157739 19 5801037 to 5801048 11 - TSS region transcription start site region 157739
Tssr157740 19 5801059 to 5801064 5 - TSS region transcription start site region 157740
Tssr157741 19 5801071 to 5801074 3 - TSS region transcription start site region 157741
Tssr157742 19 5801115 to 5801126 11 - TSS region transcription start site region 157742
Tssr154497 19 5801122 to 5801222 100 + TSS region transcription start site region 154497
Tssr157743 19 5801143 to 5801158 15 - TSS region transcription start site region 157743
Tssr157744 19 5801217 to 5801233 16 - TSS region transcription start site region 157744
Tssr157745 19 5801241 to 5801272 31 - TSS region transcription start site region 157745
Tssr157746 19 5801299 to 5801301 2 - TSS region transcription start site region 157746
Tssr157747 19 5801322 to 5801327 5 - TSS region transcription start site region 157747
Tssr157748 19 5801340 to 5801347 7 - TSS region transcription start site region 157748
Tssr157749 19 5801348 to 5801349 1 - TSS region transcription start site region 157749
Tssr157750 19 5801353 to 5801365 12 - TSS region transcription start site region 157750
Tssr157751 19 5801374 to 5801386 12 - TSS region transcription start site region 157751
Tssr157752 19 5801389 to 5801474 85 - TSS region transcription start site region 157752
Tssr157753 19 5801476 to 5801531 55 - TSS region transcription start site region 157753
Tssr157754 19 5801532 to 5801559 27 - TSS region transcription start site region 157754
Tssr157755 19 5801565 to 5801597 32 - TSS region transcription start site region 157755