Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:55927954-56231392

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tcf7l2 19 55741810 to 55933654 191844 + protein coding gene transcription factor 7 like 2, T cell specific, HMG box
Tssr157161 19 55930469 to 55930475 6 + TSS region transcription start site region 157161
Tssr157162 19 55931464 to 55931480 16 + TSS region transcription start site region 157162
Tssr157163 19 55931497 to 55931530 33 + TSS region transcription start site region 157163
Cpgi11086 19 55931528 to 55931797 269 CpG island CpG island 11086
Tssr157164 19 55931703 to 55931716 13 + TSS region transcription start site region 157164
Tssr157165 19 55932299 to 55932325 26 + TSS region transcription start site region 157165
Tssr157166 19 55932375 to 55932379 4 + TSS region transcription start site region 157166
Tssr157167 19 55932490 to 55932503 13 + TSS region transcription start site region 157167
Tssr157168 19 55932742 to 55932746 4 + TSS region transcription start site region 157168
Tssr157169 19 55933172 to 55933183 11 + TSS region transcription start site region 157169
Tssr157170 19 55938486 to 55938500 14 + TSS region transcription start site region 157170
Gm41872 19 55940237 to 55950980 10743 + lncRNA gene predicted gene, 41872
Tssr157171 19 55976675 to 55976696 21 + TSS region transcription start site region 157171
Tssr157172 19 56035094 to 56035097 3 + TSS region transcription start site region 157172
Tssr157173 19 56066127 to 56066140 13 + TSS region transcription start site region 157173
1700106J12Rik 19 56066127 to 56066933 806 unclassified gene RIKEN cDNA 1700106J12 gene
Tssr157174 19 56072106 to 56072108 2 + TSS region transcription start site region 157174
Gm4470 19 56077954 to 56081392 3438 + lncRNA gene predicted gene 4470
Cpgi11087 19 56105592 to 56105784 192 CpG island CpG island 11087
Gm31912 19 56105689 to 56109342 3653 + lncRNA gene predicted gene, 31912
Gm31965 19 56155105 to 56176419 21314 + lncRNA gene predicted gene, 31965
D19Mit84 19 56162965 to 56163112 147 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 84
Gm32028 19 56177735 to 56199050 21315 + lncRNA gene predicted gene, 32028
D19Mit33 19 56195632 to 56195893 261 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 33
Lfp1 19 56195632 to 56195893 261 QTL long free running period 1