Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:55744337-56044378

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tcf7l2 19 55741810 to 55933654 191844 + protein coding gene transcription factor 7 like 2, T cell specific, HMG box
Cpgi11083 19 55742306 to 55744427 2121 CpG island CpG island 11083
Cpgi11084 19 55787505 to 55787686 181 CpG island CpG island 11084
Tssr157104 19 55800905 to 55800909 4 + TSS region transcription start site region 157104
Tssr157105 19 55804368 to 55804372 4 + TSS region transcription start site region 157105
Tssr157106 19 55832746 to 55832757 11 + TSS region transcription start site region 157106
Tssr157107 19 55832874 to 55832888 14 + TSS region transcription start site region 157107
Tssr157108 19 55837828 to 55837831 3 + TSS region transcription start site region 157108
Ppnr 19 55841672 to 55845897 4225 + sense intronic lncRNA gene per-pentamer repeat gene
Tssr157109 19 55845946 to 55845973 27 + TSS region transcription start site region 157109
Tssr157110 19 55868191 to 55868194 3 + TSS region transcription start site region 157110
Tssr157111 19 55885885 to 55885901 16 + TSS region transcription start site region 157111
Tssr157112 19 55888932 to 55888943 11 + TSS region transcription start site region 157112
Tssr157113 19 55892673 to 55892684 11 + TSS region transcription start site region 157113
Tssr157114 19 55892690 to 55892699 9 + TSS region transcription start site region 157114
Tssr5560 19 55892724 to 55892729 5 + TSS region transcription start site region 5560
Tssr157115 19 55892740 to 55892744 4 + TSS region transcription start site region 157115
Tssr157116 19 55892929 to 55892934 5 + TSS region transcription start site region 157116
Tssr157117 19 55893124 to 55893131 7 + TSS region transcription start site region 157117
Tssr157118 19 55893145 to 55893154 9 + TSS region transcription start site region 157118
Tssr5561 19 55893210 to 55893214 4 + TSS region transcription start site region 5561
Tssr157119 19 55893286 to 55893291 5 + TSS region transcription start site region 157119
Tssr157120 19 55893313 to 55893344 31 + TSS region transcription start site region 157120
Tssr157121 19 55893352 to 55893388 36 + TSS region transcription start site region 157121
Tssr157122 19 55893393 to 55893398 5 + TSS region transcription start site region 157122
Tssr5562 19 55893400 to 55893405 5 + TSS region transcription start site region 5562
Tssr157123 19 55894337 to 55894378 41 + TSS region transcription start site region 157123
Tssr157124 19 55894447 to 55894461 14 + TSS region transcription start site region 157124
Tssr157125 19 55894472 to 55894475 3 + TSS region transcription start site region 157125
Tssr157126 19 55894477 to 55894501 24 + TSS region transcription start site region 157126
Tssr157127 19 55894508 to 55894521 13 + TSS region transcription start site region 157127
Tssr157128 19 55894606 to 55894615 9 + TSS region transcription start site region 157128
Tssr157129 19 55894914 to 55894927 13 + TSS region transcription start site region 157129
Tssr157130 19 55894948 to 55894960 12 + TSS region transcription start site region 157130
Tssr157131 19 55895145 to 55895154 9 + TSS region transcription start site region 157131
Tssr157132 19 55895156 to 55895175 19 + TSS region transcription start site region 157132
Tssr157133 19 55895197 to 55895224 27 + TSS region transcription start site region 157133
Cpgi11085 19 55895388 to 55895769 381 CpG island CpG island 11085
Tssr157134 19 55895397 to 55895414 17 + TSS region transcription start site region 157134
Tssr157135 19 55895433 to 55895454 21 + TSS region transcription start site region 157135
Tssr157136 19 55895456 to 55895483 27 + TSS region transcription start site region 157136
Tssr157137 19 55895490 to 55895497 7 + TSS region transcription start site region 157137
Tssr157138 19 55895508 to 55895511 3 + TSS region transcription start site region 157138
Tssr157139 19 55895557 to 55895566 9 + TSS region transcription start site region 157139
Tssr157140 19 55895570 to 55895581 11 + TSS region transcription start site region 157140
Tssr157141 19 55895582 to 55895591 9 + TSS region transcription start site region 157141
Tssr157142 19 55896415 to 55896420 5 + TSS region transcription start site region 157142
Tssr157143 19 55897913 to 55897931 18 + TSS region transcription start site region 157143
Tssr157144 19 55897941 to 55897950 9 + TSS region transcription start site region 157144
Tssr157145 19 55897951 to 55897966 15 + TSS region transcription start site region 157145
Tssr157146 19 55898263 to 55898274 11 + TSS region transcription start site region 157146
Tssr157147 19 55898277 to 55898289 12 + TSS region transcription start site region 157147
Tssr157148 19 55898596 to 55898606 10 + TSS region transcription start site region 157148
Tssr157149 19 55898945 to 55898978 33 + TSS region transcription start site region 157149
Tssr157150 19 55908433 to 55908479 46 + TSS region transcription start site region 157150
Tssr157151 19 55908505 to 55908517 12 + TSS region transcription start site region 157151
Tssr157152 19 55910559 to 55910577 18 + TSS region transcription start site region 157152
Tssr157153 19 55910584 to 55910595 11 + TSS region transcription start site region 157153
Tssr159863 19 55910609 to 55910652 43 - TSS region transcription start site region 159863
Tssr157154 19 55910631 to 55910652 21 + TSS region transcription start site region 157154
Tssr157155 19 55912589 to 55912608 19 + TSS region transcription start site region 157155
Tssr157156 19 55917348 to 55917362 14 + TSS region transcription start site region 157156
Tssr157157 19 55917367 to 55917377 10 + TSS region transcription start site region 157157
Tssr157158 19 55919502 to 55919518 16 + TSS region transcription start site region 157158
Tssr157159 19 55925933 to 55925947 14 + TSS region transcription start site region 157159
Tssr157160 19 55925951 to 55925979 28 + TSS region transcription start site region 157160
Tssr157161 19 55930469 to 55930475 6 + TSS region transcription start site region 157161
Tssr157162 19 55931464 to 55931480 16 + TSS region transcription start site region 157162
Tssr157163 19 55931497 to 55931530 33 + TSS region transcription start site region 157163
Cpgi11086 19 55931528 to 55931797 269 CpG island CpG island 11086
Tssr157164 19 55931703 to 55931716 13 + TSS region transcription start site region 157164
Tssr157165 19 55932299 to 55932325 26 + TSS region transcription start site region 157165
Tssr157166 19 55932375 to 55932379 4 + TSS region transcription start site region 157166
Tssr157167 19 55932490 to 55932503 13 + TSS region transcription start site region 157167
Tssr157168 19 55932742 to 55932746 4 + TSS region transcription start site region 157168
Tssr157169 19 55933172 to 55933183 11 + TSS region transcription start site region 157169
Tssr157170 19 55938486 to 55938500 14 + TSS region transcription start site region 157170
Gm41872 19 55940237 to 55950980 10743 + lncRNA gene predicted gene, 41872
Tssr157171 19 55976675 to 55976696 21 + TSS region transcription start site region 157171
Tssr157172 19 56035094 to 56035097 3 + TSS region transcription start site region 157172