Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:55369872-55741182

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vti1a 19 55316295 to 55627309 311014 + protein coding gene vesicle transport through interaction with t-SNAREs 1A
T2dm2 19 55387618 to 55387735 117 QTL type 2 diabetes mellitus 2
Sluc35 19 55387618 to 59135440 3747822 QTL susceptibility to lung cancer 35
D19Mit35 19 55387618 to 55387735 117 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 35
Tssr157087 19 55412490 to 55412538 48 + TSS region transcription start site region 157087
Tssr157088 19 55425241 to 55425254 13 + TSS region transcription start site region 157088
Tssr157089 19 55435373 to 55435380 7 + TSS region transcription start site region 157089
D19Mit104 19 55443095 to 55443200 105 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 104
Tssr157090 19 55464774 to 55464787 13 + TSS region transcription start site region 157090
Tssr157091 19 55464789 to 55464816 27 + TSS region transcription start site region 157091
Gm4466 19 55480916 to 55484621 3705 unclassified gene predicted gene 4466
Tssr157092 19 55514244 to 55514255 11 + TSS region transcription start site region 157092
Tssr157093 19 55552808 to 55552815 7 + TSS region transcription start site region 157093
2310066F23Rik 19 55554872 to 55556182 1310 unclassified gene RIKEN cDNA 2310066F23 gene
Cpgi11079 19 55593585 to 55593750 165 CpG island CpG island 11079
Cpgi11080 19 55628044 to 55628388 344 CpG island CpG island 11080
4930552P12Rik 19 55640589 to 55702204 61615 - lincRNA gene RIKEN cDNA 4930552P12 gene
Gm41871 19 55701143 to 55702134 991 + lncRNA gene predicted gene, 41871
Tssr159861 19 55718966 to 55718970 4 - TSS region transcription start site region 159861
Cpgi11081 19 55729821 to 55730109 288 CpG island CpG island 11081
Gm31734 19 55734407 to 55743225 8818 - lncRNA gene predicted gene, 31734