Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:55281121-55411148

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acsl5 19 55251884 to 55296628 44744 + protein coding gene acyl-CoA synthetase long-chain family member 5
Tssr157078 19 55284246 to 55284261 15 + TSS region transcription start site region 157078
Tssr157079 19 55284325 to 55284347 22 + TSS region transcription start site region 157079
Tssr157080 19 55285970 to 55285992 22 + TSS region transcription start site region 157080
Tssr157081 19 55286409 to 55286418 9 + TSS region transcription start site region 157081
Zdhhc6 19 55298293 to 55316032 17739 - protein coding gene zinc finger, DHHC domain containing 6
D19Mit55 19 55305015 to 55305156 141 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 55
Tssr159858 19 55311886 to 55311920 34 - TSS region transcription start site region 159858
Cpgi11078 19 55315473 to 55316750 1277 CpG island CpG island 11078
Tssr157082 19 55315625 to 55315636 11 + TSS region transcription start site region 157082
Tssr157083 19 55315673 to 55315677 4 + TSS region transcription start site region 157083
Tssr159859 19 55315904 to 55315907 3 - TSS region transcription start site region 159859
Tssr159860 19 55315980 to 55316038 58 - TSS region transcription start site region 159860
Tssr157084 19 55316278 to 55316305 27 + TSS region transcription start site region 157084
Vti1a 19 55316295 to 55627309 311014 + protein coding gene vesicle transport through interaction with t-SNAREs 1A
Tssr157085 19 55316313 to 55316367 54 + TSS region transcription start site region 157085
Tssr5559 19 55318024 to 55318025 1 + TSS region transcription start site region 5559
Tssr157086 19 55346121 to 55346148 27 + TSS region transcription start site region 157086
D19Mit35 19 55387618 to 55387735 117 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 35
T2dm2 19 55387618 to 55387735 117 QTL type 2 diabetes mellitus 2
Sluc35 19 55387618 to 59135440 3747822 QTL susceptibility to lung cancer 35