Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:55272618-55502735

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acsl5 19 55251884 to 55296628 44744 + protein coding gene acyl-CoA synthetase long-chain family member 5
Gm31595 19 55262382 to 55274479 12097 - lncRNA gene predicted gene, 31595
Tssr157078 19 55284246 to 55284261 15 + TSS region transcription start site region 157078
Tssr157079 19 55284325 to 55284347 22 + TSS region transcription start site region 157079
Tssr157080 19 55285970 to 55285992 22 + TSS region transcription start site region 157080
Tssr157081 19 55286409 to 55286418 9 + TSS region transcription start site region 157081
Zdhhc6 19 55298293 to 55316032 17739 - protein coding gene zinc finger, DHHC domain containing 6
D19Mit55 19 55305015 to 55305156 141 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 55
Tssr159858 19 55311886 to 55311920 34 - TSS region transcription start site region 159858
Cpgi11078 19 55315473 to 55316750 1277 CpG island CpG island 11078
Tssr157082 19 55315625 to 55315636 11 + TSS region transcription start site region 157082
Tssr157083 19 55315673 to 55315677 4 + TSS region transcription start site region 157083
Tssr159859 19 55315904 to 55315907 3 - TSS region transcription start site region 159859
Tssr159860 19 55315980 to 55316038 58 - TSS region transcription start site region 159860
Tssr157084 19 55316278 to 55316305 27 + TSS region transcription start site region 157084
Vti1a 19 55316295 to 55627309 311014 + protein coding gene vesicle transport through interaction with t-SNAREs 1A
Tssr157085 19 55316313 to 55316367 54 + TSS region transcription start site region 157085
Tssr5559 19 55318024 to 55318025 1 + TSS region transcription start site region 5559
Tssr157086 19 55346121 to 55346148 27 + TSS region transcription start site region 157086
Sluc35 19 55387618 to 59135440 3747822 QTL susceptibility to lung cancer 35
T2dm2 19 55387618 to 55387735 117 QTL type 2 diabetes mellitus 2
D19Mit35 19 55387618 to 55387735 117 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 35
Tssr157087 19 55412490 to 55412538 48 + TSS region transcription start site region 157087
Tssr157088 19 55425241 to 55425254 13 + TSS region transcription start site region 157088
Tssr157089 19 55435373 to 55435380 7 + TSS region transcription start site region 157089
D19Mit104 19 55443095 to 55443200 105 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 104
Tssr157090 19 55464774 to 55464787 13 + TSS region transcription start site region 157090
Tssr157091 19 55464789 to 55464816 27 + TSS region transcription start site region 157091
Gm4466 19 55480916 to 55484621 3705 unclassified gene predicted gene 4466