Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:55113788-55253800

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm31356 19 55099543 to 55118931 19388 + lncRNA gene predicted gene, 31356
Tssr159850 19 55114631 to 55114651 20 - TSS region transcription start site region 159850
Tssr159851 19 55117001 to 55117014 13 - TSS region transcription start site region 159851
Tssr159852 19 55119810 to 55119815 5 - TSS region transcription start site region 159852
Tssr159853 19 55127166 to 55127179 13 - TSS region transcription start site region 159853
Tssr159854 19 55127180 to 55127243 63 - TSS region transcription start site region 159854
Tssr159855 19 55127247 to 55127257 10 - TSS region transcription start site region 159855
Gm31418 19 55127314 to 55140840 13526 + lncRNA gene predicted gene, 31418
Gm10755 19 55132641 to 55134831 2190 unclassified gene predicted gene 10755
Tssr157063 19 55180716 to 55180733 17 + TSS region transcription start site region 157063
Tectb 19 55180733 to 55196313 15580 + protein coding gene tectorin beta
Tssr157064 19 55180799 to 55180809 10 + TSS region transcription start site region 157064
Tssr157065 19 55181883 to 55181894 11 + TSS region transcription start site region 157065
Tssr5555 19 55183654 to 55183685 31 + TSS region transcription start site region 5555
Tssr5556 19 55183788 to 55183800 12 - TSS region transcription start site region 5556
Mir6715 19 55192678 to 55192734 56 + miRNA gene microRNA 6715
Tssr159856 19 55195076 to 55195087 11 - TSS region transcription start site region 159856
Tssr157066 19 55195879 to 55195904 25 + TSS region transcription start site region 157066
Tssr5557 19 55196301 to 55196315 14 - TSS region transcription start site region 5557
Gucy2g 19 55198297 to 55241236 42939 - protein coding gene guanylate cyclase 2g
Cpgi11075 19 55207918 to 55208194 276 CpG island CpG island 11075
Tssr159857 19 55217566 to 55217577 11 - TSS region transcription start site region 159857
Cpgi11076 19 55218392 to 55218657 265 CpG island CpG island 11076
Tssr157067 19 55219709 to 55219718 9 + TSS region transcription start site region 157067
Tssr5558 19 55251834 to 55251843 9 + TSS region transcription start site region 5558
Acsl5 19 55251884 to 55296628 44744 + protein coding gene acyl-CoA synthetase long-chain family member 5
Tssr157068 19 55251898 to 55251903 5 + TSS region transcription start site region 157068
Tssr157069 19 55251925 to 55251944 19 + TSS region transcription start site region 157069
Tssr157070 19 55251952 to 55251963 11 + TSS region transcription start site region 157070
Tssr157071 19 55253641 to 55253678 37 + TSS region transcription start site region 157071
Tssr157072 19 55253693 to 55253726 33 + TSS region transcription start site region 157072