Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 19:5499137-5610575

Filter by:
35 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Snx32 19 5495274 to 5510708 15434 - protein coding gene sorting nexin 32
1700020D05Rik 19 5502767 to 5503787 1020 - protein coding gene RIKEN cDNA 1700020D05 gene
Cpgi10456 19 5503578 to 5503763 185 CpG island CpG island 10456
Tssr157610 19 5503748 to 5503760 12 - TSS region transcription start site region 157610
Tssr157611 19 5503776 to 5503792 16 - TSS region transcription start site region 157611
Cpgi10457 19 5510414 to 5511114 700 CpG island CpG island 10457
Tssr157612 19 5510446 to 5510465 19 - TSS region transcription start site region 157612
Tssr157613 19 5510467 to 5510518 51 - TSS region transcription start site region 157613
Tssr154450 19 5510730 to 5510760 30 + TSS region transcription start site region 154450
Tssr154451 19 5510908 to 5510922 14 + TSS region transcription start site region 154451
Gm31166 19 5512528 to 5550368 37840 + pseudogene predicted gene, 31166
Tssr157614 19 5512850 to 5512876 26 - TSS region transcription start site region 157614
Cpgi10458 19 5529416 to 5529665 249 CpG island CpG island 10458
Ovol1 19 5549137 to 5560575 11438 - protein coding gene ovo like zinc finger 1
Tssr154452 19 5553364 to 5553369 5 + TSS region transcription start site region 154452
Cpgi10459 19 5559655 to 5561559 1904 CpG island CpG island 10459
Tssr154453 19 5560202 to 5560216 14 + TSS region transcription start site region 154453
1810058N15Rik 19 5560260 to 5561677 1417 + lncRNA gene RIKEN cDNA 1810058N15 gene
Tssr157615 19 5560570 to 5560582 12 - TSS region transcription start site region 157615
Tssr157616 19 5560600 to 5560617 17 - TSS region transcription start site region 157616
Cpgi10460 19 5567073 to 5569061 1988 CpG island CpG island 10460
Tssr154454 19 5568002 to 5568062 60 + TSS region transcription start site region 154454
Ap5b1 19 5568025 to 5571261 3236 + protein coding gene adaptor-related protein complex 5, beta 1 subunit
Tssr154455 19 5568068 to 5568089 21 + TSS region transcription start site region 154455
Tssr154456 19 5568413 to 5568447 34 + TSS region transcription start site region 154456
Tssr5413 19 5569345 to 5569391 46 + TSS region transcription start site region 5413
Cpgi10461 19 5601693 to 5602614 921 CpG island CpG island 10461
Tssr154457 19 5601841 to 5601852 11 + TSS region transcription start site region 154457
Tssr154458 19 5601854 to 5601916 62 + TSS region transcription start site region 154458
Rnaseh2c 19 5601873 to 5602959 1086 + protein coding gene ribonuclease H2, subunit C
Kat5 19 5603014 to 5610237 7223 - protein coding gene K(lysine) acetyltransferase 5
Cpgi10462 19 5609403 to 5610432 1029 CpG island CpG island 10462
Tssr154459 19 5609840 to 5609860 20 + TSS region transcription start site region 154459
Tssr157617 19 5610038 to 5610066 28 - TSS region transcription start site region 157617
Tssr154460 19 5610065 to 5610108 43 + TSS region transcription start site region 154460