Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:5485570-5635582

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mus81 19 5482836 to 5488410 5574 - protein coding gene MUS81 structure-specific endonuclease subunit
Cpgi10453 19 5487664 to 5488370 706 CpG island CpG island 10453
Tssr157605 19 5488271 to 5488396 125 - TSS region transcription start site region 157605
1700061A03Rik 19 5488743 to 5489197 454 unclassified gene RIKEN cDNA 1700061A03 gene
Cpgi10454 19 5488914 to 5489479 565 CpG island CpG island 10454
Tssr157606 19 5488941 to 5488950 9 - TSS region transcription start site region 157606
Tssr157607 19 5488960 to 5488972 12 - TSS region transcription start site region 157607
Tssr157608 19 5489046 to 5489058 12 - TSS region transcription start site region 157608
Tssr157609 19 5489077 to 5489091 14 - TSS region transcription start site region 157609
Tssr154437 19 5489318 to 5489361 43 + TSS region transcription start site region 154437
Cpgi10455 19 5490253 to 5491763 1510 CpG island CpG island 10455
Cfl1 19 5490455 to 5494031 3576 + protein coding gene cofilin 1, non-muscle
Tssr154438 19 5490475 to 5490487 12 + TSS region transcription start site region 154438
Tssr154439 19 5490512 to 5490525 13 + TSS region transcription start site region 154439
Tssr154440 19 5490557 to 5490606 49 + TSS region transcription start site region 154440
Tssr154441 19 5493131 to 5493169 38 + TSS region transcription start site region 154441
Tssr154442 19 5493412 to 5493427 15 + TSS region transcription start site region 154442
Tssr154443 19 5493545 to 5493571 26 + TSS region transcription start site region 154443
Tssr154444 19 5493650 to 5493667 17 + TSS region transcription start site region 154444
Tssr154445 19 5493724 to 5493737 13 + TSS region transcription start site region 154445
Tssr154446 19 5493756 to 5493782 26 + TSS region transcription start site region 154446
Tssr154447 19 5493785 to 5493793 8 + TSS region transcription start site region 154447
Tssr154448 19 5493895 to 5493937 42 + TSS region transcription start site region 154448
Tssr154449 19 5494629 to 5494633 4 + TSS region transcription start site region 154449
Snx32 19 5495278 to 5510489 15211 - protein coding gene sorting nexin 32
1700020D05Rik 19 5502767 to 5503787 1020 - protein coding gene RIKEN cDNA 1700020D05 gene
Cpgi10456 19 5503578 to 5503763 185 CpG island CpG island 10456
Tssr157610 19 5503748 to 5503760 12 - TSS region transcription start site region 157610
Tssr157611 19 5503776 to 5503792 16 - TSS region transcription start site region 157611
Cpgi10457 19 5510414 to 5511114 700 CpG island CpG island 10457
Tssr157612 19 5510446 to 5510465 19 - TSS region transcription start site region 157612
Tssr157613 19 5510467 to 5510518 51 - TSS region transcription start site region 157613
Tssr154450 19 5510730 to 5510760 30 + TSS region transcription start site region 154450
Tssr154451 19 5510908 to 5510922 14 + TSS region transcription start site region 154451
Gm31166 19 5512528 to 5550368 37840 + pseudogene predicted gene, 31166
Tssr157614 19 5512850 to 5512876 26 - TSS region transcription start site region 157614
Cpgi10458 19 5529416 to 5529665 249 CpG island CpG island 10458
Ovol1 19 5549137 to 5560575 11438 - protein coding gene ovo like zinc finger 1
Tssr154452 19 5553364 to 5553369 5 + TSS region transcription start site region 154452
Cpgi10459 19 5559655 to 5561559 1904 CpG island CpG island 10459
Tssr154453 19 5560202 to 5560216 14 + TSS region transcription start site region 154453
Tssr157615 19 5560570 to 5560582 12 - TSS region transcription start site region 157615
Tssr157616 19 5560600 to 5560617 17 - TSS region transcription start site region 157616
1810058N15Rik 19 5561051 to 5561678 627 protein coding gene RIKEN cDNA 1810058N15 gene
Cpgi10460 19 5567073 to 5569061 1988 CpG island CpG island 10460
Tssr154454 19 5568002 to 5568062 60 + TSS region transcription start site region 154454
Tssr154455 19 5568068 to 5568089 21 + TSS region transcription start site region 154455
Ap5b1 19 5568074 to 5571261 3187 + protein coding gene adaptor-related protein complex 5, beta 1 subunit
Tssr154456 19 5568413 to 5568447 34 + TSS region transcription start site region 154456
Tssr5413 19 5569345 to 5569391 46 + TSS region transcription start site region 5413
Cpgi10461 19 5601693 to 5602614 921 CpG island CpG island 10461
Tssr154457 19 5601841 to 5601852 11 + TSS region transcription start site region 154457
Tssr154458 19 5601854 to 5601916 62 + TSS region transcription start site region 154458
Rnaseh2c 19 5601873 to 5602959 1086 + protein coding gene ribonuclease H2, subunit C
Kat5 19 5603017 to 5610094 7077 - protein coding gene K(lysine) acetyltransferase 5
Cpgi10462 19 5609403 to 5610432 1029 CpG island CpG island 10462
Tssr154459 19 5609840 to 5609860 20 + TSS region transcription start site region 154459
Tssr157617 19 5610038 to 5610066 28 - TSS region transcription start site region 157617
Tssr154460 19 5610065 to 5610108 43 + TSS region transcription start site region 154460
Tssr5414 19 5614052 to 5614053 1 - TSS region transcription start site region 5414