Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 19:5453776-5553792

Filter by:
66 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fosl1 19 5447698 to 5455938 8240 + protein coding gene fos-like antigen 1
Ccdc85b 19 5453163 to 5457563 4400 - protein coding gene coiled-coil domain containing 85B
Tssr154423 19 5454423 to 5454429 6 + TSS region transcription start site region 154423
Tssr154424 19 5455049 to 5455068 19 + TSS region transcription start site region 154424
Tssr154425 19 5455590 to 5455612 22 + TSS region transcription start site region 154425
Cpgi10449 19 5456356 to 5457758 1402 CpG island CpG island 10449
Tssr157602 19 5457488 to 5457494 6 - TSS region transcription start site region 157602
Tssr157603 19 5457504 to 5457573 69 - TSS region transcription start site region 157603
Cpgi10450 19 5460496 to 5461213 717 CpG island CpG island 10450
Tssr154426 19 5460608 to 5460638 30 + TSS region transcription start site region 154426
Fibp 19 5460615 to 5465051 4436 + protein coding gene fibroblast growth factor (acidic) intracellular binding protein
Tssr154427 19 5460648 to 5460655 7 + TSS region transcription start site region 154427
Tssr5412 19 5460659 to 5460666 7 + TSS region transcription start site region 5412
Tssr154428 19 5464057 to 5464108 51 + TSS region transcription start site region 154428
Ctsw 19 5465043 to 5468507 3464 - protein coding gene cathepsin W
Tssr157604 19 5468487 to 5468506 19 - TSS region transcription start site region 157604
Cpgi10451 19 5473728 to 5474018 290 CpG island CpG island 10451
Efemp2 19 5473959 to 5481854 7895 + protein coding gene epidermal growth factor-containing fibulin-like extracellular matrix protein 2
Cpgi10452 19 5474319 to 5475456 1137 CpG island CpG island 10452
Tssr154429 19 5474617 to 5474644 27 + TSS region transcription start site region 154429
Tssr154430 19 5474681 to 5474775 94 + TSS region transcription start site region 154430
Tssr154431 19 5474796 to 5474822 26 + TSS region transcription start site region 154431
Tssr154432 19 5474878 to 5474895 17 + TSS region transcription start site region 154432
Tssr154433 19 5474911 to 5474938 27 + TSS region transcription start site region 154433
Tssr154434 19 5476132 to 5476138 6 + TSS region transcription start site region 154434
Tssr154435 19 5480085 to 5480098 13 + TSS region transcription start site region 154435
Tssr154436 19 5480272 to 5480320 48 + TSS region transcription start site region 154436
Mus81 19 5482561 to 5488389 5828 - protein coding gene MUS81 structure-specific endonuclease subunit
Cpgi10453 19 5487664 to 5488370 706 CpG island CpG island 10453
Tssr157605 19 5488271 to 5488396 125 - TSS region transcription start site region 157605
1700061A03Rik 19 5488744 to 5489198 454 - lncRNA gene RIKEN cDNA 1700061A03 gene
Cpgi10454 19 5488914 to 5489479 565 CpG island CpG island 10454
Tssr157606 19 5488941 to 5488950 9 - TSS region transcription start site region 157606
Tssr157607 19 5488960 to 5488972 12 - TSS region transcription start site region 157607
Tssr157608 19 5489046 to 5489058 12 - TSS region transcription start site region 157608
Tssr157609 19 5489077 to 5489091 14 - TSS region transcription start site region 157609
Tssr154437 19 5489318 to 5489361 43 + TSS region transcription start site region 154437
Cpgi10455 19 5490253 to 5491763 1510 CpG island CpG island 10455
Cfl1 19 5490455 to 5494031 3576 + protein coding gene cofilin 1, non-muscle
Tssr154438 19 5490475 to 5490487 12 + TSS region transcription start site region 154438
Tssr154439 19 5490512 to 5490525 13 + TSS region transcription start site region 154439
Tssr154440 19 5490557 to 5490606 49 + TSS region transcription start site region 154440
Tssr154441 19 5493131 to 5493169 38 + TSS region transcription start site region 154441
Tssr154442 19 5493412 to 5493427 15 + TSS region transcription start site region 154442
Tssr154443 19 5493545 to 5493571 26 + TSS region transcription start site region 154443
Tssr154444 19 5493650 to 5493667 17 + TSS region transcription start site region 154444
Tssr154445 19 5493724 to 5493737 13 + TSS region transcription start site region 154445
Tssr154446 19 5493756 to 5493782 26 + TSS region transcription start site region 154446
Tssr154447 19 5493785 to 5493793 8 + TSS region transcription start site region 154447
Tssr154448 19 5493895 to 5493937 42 + TSS region transcription start site region 154448
Tssr154449 19 5494629 to 5494633 4 + TSS region transcription start site region 154449
Snx32 19 5495274 to 5510708 15434 - protein coding gene sorting nexin 32
1700020D05Rik 19 5502767 to 5503787 1020 - protein coding gene RIKEN cDNA 1700020D05 gene
Cpgi10456 19 5503578 to 5503763 185 CpG island CpG island 10456
Tssr157610 19 5503748 to 5503760 12 - TSS region transcription start site region 157610
Tssr157611 19 5503776 to 5503792 16 - TSS region transcription start site region 157611
Cpgi10457 19 5510414 to 5511114 700 CpG island CpG island 10457
Tssr157612 19 5510446 to 5510465 19 - TSS region transcription start site region 157612
Tssr157613 19 5510467 to 5510518 51 - TSS region transcription start site region 157613
Tssr154450 19 5510730 to 5510760 30 + TSS region transcription start site region 154450
Tssr154451 19 5510908 to 5510922 14 + TSS region transcription start site region 154451
Gm31166 19 5512528 to 5550368 37840 + pseudogene predicted gene, 31166
Tssr157614 19 5512850 to 5512876 26 - TSS region transcription start site region 157614
Cpgi10458 19 5529416 to 5529665 249 CpG island CpG island 10458
Ovol1 19 5549137 to 5560575 11438 - protein coding gene ovo like zinc finger 1
Tssr154452 19 5553364 to 5553369 5 + TSS region transcription start site region 154452