Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:54018385-54381323

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14 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Shoc2 19 53944306 to 54033268 88962 + protein coding gene Shoc2, leucine rich repeat scaffold protein
Tssr157055 19 54020381 to 54020386 5 + TSS region transcription start site region 157055
Cpgi11071 19 54044508 to 54047844 3336 CpG island CpG island 11071
Tssr157056 19 54045065 to 54045082 17 + TSS region transcription start site region 157056
Adra2a 19 54045182 to 54048982 3800 + protein coding gene adrenergic receptor, alpha 2a
Tssr157057 19 54045233 to 54045244 11 + TSS region transcription start site region 157057
Tssr157058 19 54045245 to 54045248 3 + TSS region transcription start site region 157058
Tssr157059 19 54045251 to 54045267 16 + TSS region transcription start site region 157059
Tssr157060 19 54045588 to 54045603 15 + TSS region transcription start site region 157060
Tssr157061 19 54045743 to 54045753 10 + TSS region transcription start site region 157061
Cpgi11072 19 54114953 to 54115202 249 CpG island CpG island 11072
Gm41865 19 54154877 to 54175117 20240 + lncRNA gene predicted gene, 41865
Cpgi11073 19 54192551 to 54193045 494 CpG island CpG island 11073
Gm41866 19 54198385 to 54201323 2938 - lncRNA gene predicted gene, 41866