Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:53945259-54148982

16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi11070	19	53943854 to 53945848	1994		CpG island	CpG island 11070
Shoc2	19	53944306 to 54033268	88962	+	protein coding gene	Shoc2, leucine rich repeat scaffold protein
Tssr157052	19	53945916 to 53945918	2	+	TSS region	transcription start site region 157052
Tssr157053	19	53950035 to 53950052	17	+	TSS region	transcription start site region 157053
Tssr157054	19	53950390 to 53950435	45	+	TSS region	transcription start site region 157054
4930484I04Rik	19	53976461 to 54001441	24980		unclassified non-coding RNA gene	RIKEN cDNA 4930484I04 gene
Tssr157055	19	54020381 to 54020386	5	+	TSS region	transcription start site region 157055
Cpgi11071	19	54044508 to 54047844	3336		CpG island	CpG island 11071
Tssr157056	19	54045065 to 54045082	17	+	TSS region	transcription start site region 157056
Adra2a	19	54045182 to 54048982	3800	+	protein coding gene	adrenergic receptor, alpha 2a
Tssr157057	19	54045233 to 54045244	11	+	TSS region	transcription start site region 157057
Tssr157058	19	54045245 to 54045248	3	+	TSS region	transcription start site region 157058
Tssr157059	19	54045251 to 54045267	16	+	TSS region	transcription start site region 157059
Tssr157060	19	54045588 to 54045603	15	+	TSS region	transcription start site region 157060
Tssr157061	19	54045743 to 54045753	10	+	TSS region	transcription start site region 157061
Cpgi11072	19	54114953 to 54115202	249		CpG island	CpG island 11072