Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:53924840-53964867

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pdcd4 19 53892231 to 53929861 37630 + protein coding gene programmed cell death 4
Tssr157046 19 53929260 to 53929276 16 + TSS region transcription start site region 157046
Tssr157047 19 53929280 to 53929291 11 + TSS region transcription start site region 157047
Tssr157048 19 53929371 to 53929385 14 + TSS region transcription start site region 157048
Bbip1 19 53929677 to 53944627 14950 - protein coding gene BBSome interacting protein 1
Cpgi11070 19 53943854 to 53945848 1994 CpG island CpG island 11070
Tssr157049 19 53944063 to 53944096 33 + TSS region transcription start site region 157049
Tssr159836 19 53944165 to 53944226 61 - TSS region transcription start site region 159836
Tssr159837 19 53944233 to 53944255 22 - TSS region transcription start site region 159837
Tssr5553 19 53944259 to 53944264 5 - TSS region transcription start site region 5553
Shoc2 19 53944306 to 54033268 88962 + protein coding gene Shoc2, leucine rich repeat scaffold protein
Tssr159838 19 53944436 to 53944487 51 - TSS region transcription start site region 159838
Tssr159839 19 53944621 to 53944632 11 - TSS region transcription start site region 159839
Tssr157050 19 53944840 to 53944867 27 + TSS region transcription start site region 157050
Tssr157051 19 53944870 to 53944907 37 + TSS region transcription start site region 157051
Tssr157052 19 53945916 to 53945918 2 + TSS region transcription start site region 157052
Tssr157053 19 53950035 to 53950052 17 + TSS region transcription start site region 157053
Tssr157054 19 53950390 to 53950435 45 + TSS region transcription start site region 157054