Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:53797914-53907923

Filter by:
25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rbm20 19 53677306 to 53867080 189774 + protein coding gene RNA binding motif protein 20
Tssr157031 19 53800852 to 53800863 11 + TSS region transcription start site region 157031
Tssr157032 19 53807534 to 53807543 9 + TSS region transcription start site region 157032
Gm16299 19 53819354 to 53825128 5774 - antisense lncRNA gene predicted gene 16299
Tssr157033 19 53821674 to 53821709 35 + TSS region transcription start site region 157033
Tssr157034 19 53832635 to 53832654 19 + TSS region transcription start site region 157034
Cpgi11068 19 53843240 to 53843412 172 CpG island CpG island 11068
Tssr157035 19 53852914 to 53852923 9 + TSS region transcription start site region 157035
Gm41863 19 53855298 to 53860220 4922 - lncRNA gene predicted gene, 41863
Tssr157036 19 53863616 to 53863626 10 + TSS region transcription start site region 157036
Gm30990 19 53871785 to 53903185 31400 - lncRNA gene predicted gene, 30990
Tssr5551 19 53874818 to 53874825 7 - TSS region transcription start site region 5551
Tssr157037 19 53891258 to 53891264 6 + TSS region transcription start site region 157037
Pdcd4 19 53892231 to 53929861 37630 + protein coding gene programmed cell death 4
Tssr157038 19 53893807 to 53893826 19 + TSS region transcription start site region 157038
Cpgi11069 19 53902769 to 53904205 1436 CpG island CpG island 11069
Tssr157039 19 53903234 to 53903277 43 + TSS region transcription start site region 157039
Tssr5552 19 53903345 to 53903366 21 + TSS region transcription start site region 5552
Tssr157040 19 53903384 to 53903403 19 + TSS region transcription start site region 157040
Tssr157041 19 53903808 to 53903827 19 + TSS region transcription start site region 157041
2310035P21Rik 19 53903995 to 53904957 962 unclassified gene RIKEN cDNA 2310035P21 gene
Tssr157042 19 53906234 to 53906255 21 + TSS region transcription start site region 157042
Tssr157043 19 53906524 to 53906545 21 + TSS region transcription start site region 157043
Tssr157044 19 53906573 to 53906593 20 + TSS region transcription start site region 157044
Tssr157045 19 53907366 to 53907376 10 + TSS region transcription start site region 157045