Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:53550865-53850887

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr159832 19 53573319 to 53573331 12 - TSS region transcription start site region 159832
Nutf2-ps1 19 53588204 to 53589067 863 - pseudogene nuclear transport factor 2, pseudogene 1
Cpgi11065 19 53599875 to 53601543 1668 CpG island CpG island 11065
Tssr159833 19 53600005 to 53600013 8 - TSS region transcription start site region 159833
Tssr157000 19 53600160 to 53600174 14 + TSS region transcription start site region 157000
Tssr157001 19 53600377 to 53600435 58 + TSS region transcription start site region 157001
Smc3 19 53600396 to 53645831 45435 + protein coding gene structural maintenance of chromosomes 3
Tssr157002 19 53600449 to 53600478 29 + TSS region transcription start site region 157002
Tssr157003 19 53609367 to 53609371 4 + TSS region transcription start site region 157003
Tssr157004 19 53618891 to 53618896 5 + TSS region transcription start site region 157004
Tssr157005 19 53621826 to 53621861 35 + TSS region transcription start site region 157005
Tssr157006 19 53623045 to 53623058 13 + TSS region transcription start site region 157006
Tssr157007 19 53623149 to 53623186 37 + TSS region transcription start site region 157007
Tssr157008 19 53633987 to 53634005 18 + TSS region transcription start site region 157008
Tssr157009 19 53639327 to 53639369 42 + TSS region transcription start site region 157009
Tssr157010 19 53660987 to 53661003 16 + TSS region transcription start site region 157010
Gm46653 19 53673178 to 53675863 2685 - lncRNA gene predicted gene, 46653
Cpgi11066 19 53676228 to 53677711 1483 CpG island CpG island 11066
Tssr157011 19 53676373 to 53676416 43 + TSS region transcription start site region 157011
Tssr157012 19 53677286 to 53677291 5 + TSS region transcription start site region 157012
Rbm20 19 53677306 to 53867080 189774 + protein coding gene RNA binding motif protein 20
Tssr157013 19 53677327 to 53677340 13 + TSS region transcription start site region 157013
Tssr157014 19 53677363 to 53677379 16 + TSS region transcription start site region 157014
Tssr157015 19 53677395 to 53677425 30 + TSS region transcription start site region 157015
Tssr157016 19 53700641 to 53700653 12 + TSS region transcription start site region 157016
Tssr157017 19 53700743 to 53700750 7 + TSS region transcription start site region 157017
Tssr157018 19 53700865 to 53700887 22 + TSS region transcription start site region 157018
Cpgi11067 19 53704916 to 53705297 381 CpG island CpG island 11067
Tssr157019 19 53717845 to 53717857 12 + TSS region transcription start site region 157019
Tssr157020 19 53717891 to 53717904 13 + TSS region transcription start site region 157020
Tssr157021 19 53717919 to 53717937 18 + TSS region transcription start site region 157021
Tssr157022 19 53717968 to 53717982 14 + TSS region transcription start site region 157022
Tssr157023 19 53718024 to 53718041 17 + TSS region transcription start site region 157023
Tssr157024 19 53739239 to 53739244 5 + TSS region transcription start site region 157024
Tssr157025 19 53749025 to 53749028 3 + TSS region transcription start site region 157025
Gm30943 19 53754244 to 53758239 3995 + lncRNA gene predicted gene, 30943
Tanidd1 19 53764166 to 53764287 121 QTL TallyHo associated non-insulin dependent diabetes mellitus 1
D19Mit103 19 53764166 to 53764287 121 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 103
Gm16298 19 53767891 to 53768310 419 - pseudogene predicted gene 16298
Gm30890 19 53770365 to 53788290 17925 - lncRNA gene predicted gene, 30890
Tssr157026 19 53771828 to 53771838 10 + TSS region transcription start site region 157026
Tssr159834 19 53789697 to 53789706 9 - TSS region transcription start site region 159834
Tssr159835 19 53791839 to 53791847 8 - TSS region transcription start site region 159835
Tssr157027 19 53793266 to 53793275 9 + TSS region transcription start site region 157027
Tssr157028 19 53793291 to 53793341 50 + TSS region transcription start site region 157028
Tssr157029 19 53793347 to 53793392 45 + TSS region transcription start site region 157029
Tssr157030 19 53793397 to 53793411 14 + TSS region transcription start site region 157030
Tssr157031 19 53800852 to 53800863 11 + TSS region transcription start site region 157031
Tssr157032 19 53807534 to 53807543 9 + TSS region transcription start site region 157032
Gm16299 19 53819354 to 53825128 5774 - antisense lncRNA gene predicted gene 16299
Tssr157033 19 53821674 to 53821709 35 + TSS region transcription start site region 157033
Tssr157034 19 53832635 to 53832654 19 + TSS region transcription start site region 157034
Cpgi11068 19 53843240 to 53843412 172 CpG island CpG island 11068