Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:53545396-53700831

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr156999 19 53547929 to 53547941 12 + TSS region transcription start site region 156999
Tssr159832 19 53573319 to 53573331 12 - TSS region transcription start site region 159832
Nutf2-ps1 19 53588204 to 53589067 863 - pseudogene nuclear transport factor 2, pseudogene 1
Cpgi11065 19 53599875 to 53601543 1668 CpG island CpG island 11065
Tssr159833 19 53600005 to 53600013 8 - TSS region transcription start site region 159833
Tssr157000 19 53600160 to 53600174 14 + TSS region transcription start site region 157000
Tssr157001 19 53600377 to 53600435 58 + TSS region transcription start site region 157001
Smc3 19 53600396 to 53645831 45435 + protein coding gene structural maintenance of chromosomes 3
Tssr157002 19 53600449 to 53600478 29 + TSS region transcription start site region 157002
Tssr157003 19 53609367 to 53609371 4 + TSS region transcription start site region 157003
Tssr157004 19 53618891 to 53618896 5 + TSS region transcription start site region 157004
Tssr157005 19 53621826 to 53621861 35 + TSS region transcription start site region 157005
Tssr157006 19 53623045 to 53623058 13 + TSS region transcription start site region 157006
Tssr157007 19 53623149 to 53623186 37 + TSS region transcription start site region 157007
Tssr157008 19 53633987 to 53634005 18 + TSS region transcription start site region 157008
Tssr157009 19 53639327 to 53639369 42 + TSS region transcription start site region 157009
Tssr157010 19 53660987 to 53661003 16 + TSS region transcription start site region 157010
Gm46653 19 53673178 to 53675863 2685 - lncRNA gene predicted gene, 46653
Cpgi11066 19 53676228 to 53677711 1483 CpG island CpG island 11066
Tssr157011 19 53676373 to 53676416 43 + TSS region transcription start site region 157011
Tssr157012 19 53677286 to 53677291 5 + TSS region transcription start site region 157012
Rbm20 19 53677306 to 53867080 189774 + protein coding gene RNA binding motif protein 20
Tssr157013 19 53677327 to 53677340 13 + TSS region transcription start site region 157013
Tssr157014 19 53677363 to 53677379 16 + TSS region transcription start site region 157014
Tssr157015 19 53677395 to 53677425 30 + TSS region transcription start site region 157015
Tssr157016 19 53700641 to 53700653 12 + TSS region transcription start site region 157016
Tssr157017 19 53700743 to 53700750 7 + TSS region transcription start site region 157017