Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:53394721-53534833

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr156979 19 53421229 to 53421233 4 + TSS region transcription start site region 156979
Tssr156980 19 53421314 to 53421328 14 + TSS region transcription start site region 156980
Tssr156981 19 53421374 to 53421386 12 + TSS region transcription start site region 156981
Tssr156982 19 53421619 to 53421647 28 + TSS region transcription start site region 156982
Tssr159820 19 53423343 to 53423362 19 - TSS region transcription start site region 159820
Cpgi11061 19 53423478 to 53423905 427 CpG island CpG island 11061
Tssr159821 19 53424228 to 53424236 8 - TSS region transcription start site region 159821
Tssr156983 19 53424412 to 53424417 5 + TSS region transcription start site region 156983
Tssr159822 19 53424728 to 53424744 16 - TSS region transcription start site region 159822
Cpgi11062 19 53424756 to 53425026 270 CpG island CpG island 11062
Tssr159823 19 53424787 to 53424801 14 - TSS region transcription start site region 159823
D19Mit54 19 53439387 to 53439513 126 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 54
Mirt1 19 53441212 to 53464796 23584 - lincRNA gene myocardial infarction associated transcript 1
Tssr159824 19 53441471 to 53441479 8 - TSS region transcription start site region 159824
Tssr159825 19 53451518 to 53451534 16 - TSS region transcription start site region 159825
Tssr159826 19 53460248 to 53460262 14 - TSS region transcription start site region 159826
Tssr156984 19 53460610 to 53460654 44 + TSS region transcription start site region 156984
4833407H14Rik 19 53460631 to 53462723 2092 + lincRNA gene RIKEN cDNA 4833407H14 gene
Tssr159827 19 53464721 to 53464833 112 - TSS region transcription start site region 159827
Gm30826 19 53488977 to 53492649 3672 - lncRNA gene predicted gene, 30826
Cpgi11063 19 53500398 to 53500787 389 CpG island CpG island 11063
Cpgi11064 19 53528650 to 53530195 1545 CpG island CpG island 11064
Tssr159828 19 53528872 to 53528881 9 - TSS region transcription start site region 159828
Tssr159829 19 53528895 to 53528909 14 - TSS region transcription start site region 159829
Tssr159830 19 53528961 to 53528989 28 - TSS region transcription start site region 159830
Tssr156985 19 53529100 to 53529105 5 + TSS region transcription start site region 156985
Tssr156986 19 53529137 to 53529151 14 + TSS region transcription start site region 156986
Dusp5 19 53529318 to 53541322 12004 + protein coding gene dual specificity phosphatase 5
Tssr156987 19 53533810 to 53533821 11 + TSS region transcription start site region 156987
Tssr156988 19 53533824 to 53533839 15 + TSS region transcription start site region 156988
Tssr156989 19 53533901 to 53533912 11 + TSS region transcription start site region 156989
Tssr156990 19 53533926 to 53533942 16 + TSS region transcription start site region 156990