Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:53200495-53420552

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Add3 19 53140443 to 53247326 106883 + protein coding gene adducin 3 (gamma)
1700001K23Rik 19 53248736 to 53255205 6469 - lncRNA gene RIKEN cDNA 1700001K23 gene
Tssr156964 19 53251249 to 53251285 36 + TSS region transcription start site region 156964
Tssr159810 19 53255185 to 53255196 11 - TSS region transcription start site region 159810
Gm36339 19 53265747 to 53266864 1117 + pseudogene predicted gene, 36339
Cpgi11055 19 53273988 to 53274407 419 CpG island CpG island 11055
Tssr159811 19 53283904 to 53283915 11 - TSS region transcription start site region 159811
D19Mit75 19 53309971 to 53310067 96 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 75
Cpgi11056 19 53310323 to 53312018 1695 CpG island CpG island 11056
Tssr156965 19 53310420 to 53310447 27 + TSS region transcription start site region 156965
Tssr156966 19 53310458 to 53310463 5 + TSS region transcription start site region 156966
Tssr156967 19 53310475 to 53310494 19 + TSS region transcription start site region 156967
Tssr156968 19 53310495 to 53310552 57 + TSS region transcription start site region 156968
Mxi1 19 53310506 to 53375810 65304 + protein coding gene MAX interactor 1, dimerization protein
Tssr156969 19 53310570 to 53310579 9 + TSS region transcription start site region 156969
Tssr156970 19 53310858 to 53310871 13 + TSS region transcription start site region 156970
Tssr156971 19 53311375 to 53311391 16 + TSS region transcription start site region 156971
Cpgi11057 19 53312452 to 53314612 2160 CpG island CpG island 11057
Tssr159812 19 53313253 to 53313270 17 - TSS region transcription start site region 159812
Tssr159813 19 53313292 to 53313310 18 - TSS region transcription start site region 159813
Tssr156972 19 53313424 to 53313435 11 + TSS region transcription start site region 156972
Gm30541 19 53317356 to 53326998 9642 - lncRNA gene predicted gene, 30541
Tssr159814 19 53318557 to 53318607 50 - TSS region transcription start site region 159814
Tssr5550 19 53319264 to 53319266 2 + TSS region transcription start site region 5550
Cpgi11058 19 53325554 to 53326096 542 CpG island CpG island 11058
Cpgi11059 19 53329122 to 53330574 1452 CpG island CpG island 11059
Tssr156973 19 53329424 to 53329478 54 + TSS region transcription start site region 156973
Tssr156974 19 53329507 to 53329518 11 + TSS region transcription start site region 156974
Tssr156975 19 53352887 to 53352893 6 + TSS region transcription start site region 156975
Tssr156976 19 53357243 to 53357252 9 + TSS region transcription start site region 156976
Gm10197 19 53371566 to 53371766 200 - protein coding gene predicted gene 10197
Smndc1 19 53379214 to 53390573 11359 - protein coding gene survival motor neuron domain containing 1
Tssr159815 19 53389671 to 53389675 4 - TSS region transcription start site region 159815
Cpgi11060 19 53389796 to 53391110 1314 CpG island CpG island 11060
Tssr159816 19 53390535 to 53390544 9 - TSS region transcription start site region 159816
Tssr159817 19 53390550 to 53390555 5 - TSS region transcription start site region 159817
Tssr159818 19 53390559 to 53390581 22 - TSS region transcription start site region 159818
Tssr159819 19 53390589 to 53390622 33 - TSS region transcription start site region 159819
Tssr156977 19 53390773 to 53390820 47 + TSS region transcription start site region 156977
8030456M14Rik 19 53390788 to 53391796 1008 unclassified gene RIKEN cDNA 8030456M14 gene
Tssr156978 19 53390881 to 53390930 49 + TSS region transcription start site region 156978