Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 19:5316965-5417037

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54 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nstr1 19 5321112 to 5321310 198 QTL nerve sheath tumor resistance QTL 1
D19Mit59 19 5321112 to 5321310 198 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 59
Gm50208 19 5321606 to 5321798 192 + pseudogene predicted gene, 50208
Cpgi10442 19 5323944 to 5324095 151 CpG island CpG island 10442
Gm7074 19 5324333 to 5325253 920 + pseudogene predicted gene 7074
Tssr154401 19 5328000 to 5328017 17 + TSS region transcription start site region 154401
Tssr154402 19 5328049 to 5328061 12 + TSS region transcription start site region 154402
Tssr154403 19 5335619 to 5335630 11 + TSS region transcription start site region 154403
Tssr154404 19 5335644 to 5335651 7 + TSS region transcription start site region 154404
Catsper1 19 5335741 to 5344280 8539 + protein coding gene cation channel, sperm associated 1
Cst6 19 5344705 to 5349574 4869 - protein coding gene cystatin E/M
Cpgi10443 19 5349104 to 5349507 403 CpG island CpG island 10443
Tssr157571 19 5349340 to 5349358 18 - TSS region transcription start site region 157571
Banf1 19 5364633 to 5366876 2243 - protein coding gene BAF nuclear assembly factor 1
Tssr157572 19 5364802 to 5364825 23 - TSS region transcription start site region 157572
Tssr157573 19 5364859 to 5364878 19 - TSS region transcription start site region 157573
Tssr157574 19 5364893 to 5364918 25 - TSS region transcription start site region 157574
Cpgi10444 19 5365701 to 5367695 1994 CpG island CpG island 10444
Tssr157575 19 5366253 to 5366264 11 - TSS region transcription start site region 157575
Tssr157576 19 5366269 to 5366280 11 - TSS region transcription start site region 157576
Tssr157577 19 5366285 to 5366378 93 - TSS region transcription start site region 157577
Tssr154405 19 5366387 to 5366421 34 + TSS region transcription start site region 154405
Tssr157578 19 5366598 to 5366611 13 - TSS region transcription start site region 157578
Tssr157579 19 5366626 to 5366663 37 - TSS region transcription start site region 157579
Tssr154406 19 5366764 to 5366851 87 + TSS region transcription start site region 154406
Eif1ad 19 5366813 to 5371518 4705 + protein coding gene eukaryotic translation initiation factor 1A domain containing
Tssr154407 19 5366948 to 5366962 14 + TSS region transcription start site region 154407
Tssr154408 19 5366965 to 5367037 72 + TSS region transcription start site region 154408
Sart1 19 5377523 to 5388703 11180 - protein coding gene squamous cell carcinoma antigen recognized by T cells 1
Cpgi10445 19 5387749 to 5389130 1381 CpG island CpG island 10445
D330050I16Rik 19 5388336 to 5389601 1265 + lncRNA gene RIKEN cDNA D330050I16 gene
Tssr157580 19 5388629 to 5388641 12 - TSS region transcription start site region 157580
Tssr157581 19 5388656 to 5388691 35 - TSS region transcription start site region 157581
Tssr157582 19 5388726 to 5388735 9 - TSS region transcription start site region 157582
Tssr154409 19 5388814 to 5388831 17 + TSS region transcription start site region 154409
Tssr154410 19 5388838 to 5388885 47 + TSS region transcription start site region 154410
Tssr157583 19 5389924 to 5389942 18 - TSS region transcription start site region 157583
Tsga10ip 19 5390049 to 5402526 12477 - protein coding gene testis specific 10 interacting protein
Tssr157584 19 5394335 to 5394383 48 - TSS region transcription start site region 157584
Tssr157585 19 5394385 to 5394402 17 - TSS region transcription start site region 157585
Tssr154411 19 5394632 to 5394637 5 + TSS region transcription start site region 154411
Tssr157586 19 5402460 to 5402484 24 - TSS region transcription start site region 157586
Tssr157587 19 5402493 to 5402528 35 - TSS region transcription start site region 157587
Tssr154412 19 5406089 to 5406093 4 + TSS region transcription start site region 154412
Tssr157588 19 5406601 to 5406606 5 - TSS region transcription start site region 157588
Tssr5410 19 5406796 to 5406836 40 + TSS region transcription start site region 5410
4930481A15Rik 19 5406815 to 5422847 16032 + lncRNA gene RIKEN cDNA 4930481A15 gene
Tssr154413 19 5406864 to 5406880 16 + TSS region transcription start site region 154413
Tssr157589 19 5408432 to 5408468 36 - TSS region transcription start site region 157589
Tssr154414 19 5414888 to 5414912 24 + TSS region transcription start site region 154414
Tssr154415 19 5414974 to 5414978 4 + TSS region transcription start site region 154415
Gm6293 19 5415565 to 5415759 194 - pseudogene predicted pseudogene 6293
Cpgi10446 19 5415636 to 5415867 231 CpG island CpG island 10446
Tssr157590 19 5415789 to 5415793 4 - TSS region transcription start site region 157590