Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:53070795-53300814

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30234 19 53050716 to 53105907 55191 - lncRNA gene predicted gene, 30234
Tssr159805 19 53076132 to 53076168 36 - TSS region transcription start site region 159805
Tssr156936 19 53076238 to 53076247 9 + TSS region transcription start site region 156936
1700054A03Rik 19 53076252 to 53084392 8140 + lincRNA gene RIKEN cDNA 1700054A03 gene
Gm41862 19 53085037 to 53088696 3659 + lncRNA gene predicted gene, 41862
Tssr156937 19 53085101 to 53085110 9 + TSS region transcription start site region 156937
D19Mit114 19 53103189 to 53103519 330 DNA segment DNA Segment, Chr 19, Massachusetts Institute of Technology-114
Gm30381 19 53127579 to 53131241 3662 + lncRNA gene predicted gene, 30381
Tssr156938 19 53128698 to 53128708 10 + TSS region transcription start site region 156938
Tssr156939 19 53131253 to 53131254 1 + TSS region transcription start site region 156939
Gm9618 19 53133413 to 53139839 6426 - lncRNA gene predicted gene 9618
Tssr156940 19 53140430 to 53140449 19 + TSS region transcription start site region 156940
Add3 19 53140443 to 53247326 106883 + protein coding gene adducin 3 (gamma)
Tssr156941 19 53140471 to 53140505 34 + TSS region transcription start site region 156941
Cpgi11052 19 53140482 to 53140790 308 CpG island CpG island 11052
Tssr156942 19 53140508 to 53140525 17 + TSS region transcription start site region 156942
Tssr156943 19 53140536 to 53140593 57 + TSS region transcription start site region 156943
Tssr156944 19 53140609 to 53140620 11 + TSS region transcription start site region 156944
Tssr156945 19 53140629 to 53140645 16 + TSS region transcription start site region 156945
Cpgi11053 19 53142091 to 53143643 1552 CpG island CpG island 11053
Tssr156946 19 53142775 to 53142778 3 + TSS region transcription start site region 156946
Tssr156947 19 53142785 to 53142803 18 + TSS region transcription start site region 156947
Tssr159806 19 53143147 to 53143177 30 - TSS region transcription start site region 159806
Gm24724 19 53159757 to 53159863 106 - snRNA gene predicted gene, 24724
Cpgi11054 19 53184385 to 53184559 174 CpG island CpG island 11054
Tssr156948 19 53184432 to 53184435 3 + TSS region transcription start site region 156948
Tssr156949 19 53185710 to 53185719 9 + TSS region transcription start site region 156949
Tssr5549 19 53185740 to 53185750 10 + TSS region transcription start site region 5549
Tssr156950 19 53185759 to 53185772 13 + TSS region transcription start site region 156950
Tssr156951 19 53185795 to 53185814 19 + TSS region transcription start site region 156951
Tssr156952 19 53185815 to 53185826 11 + TSS region transcription start site region 156952
Tssr159807 19 53188364 to 53188375 11 - TSS region transcription start site region 159807
Tssr156953 19 53194284 to 53194297 13 + TSS region transcription start site region 156953
Tssr156954 19 53194308 to 53194319 11 + TSS region transcription start site region 156954
Tssr156955 19 53194335 to 53194346 11 + TSS region transcription start site region 156955
Tssr156956 19 53194358 to 53194415 57 + TSS region transcription start site region 156956
Tssr156957 19 53194496 to 53194507 11 + TSS region transcription start site region 156957
Tssr156958 19 53194526 to 53194544 18 + TSS region transcription start site region 156958
Tssr159808 19 53195231 to 53195236 5 - TSS region transcription start site region 159808
Tssr156959 19 53195330 to 53195361 31 + TSS region transcription start site region 156959
Tssr156960 19 53195469 to 53195485 16 + TSS region transcription start site region 156960
Tssr156961 19 53198000 to 53198008 8 + TSS region transcription start site region 156961
Tssr156962 19 53198020 to 53198025 5 + TSS region transcription start site region 156962
Tssr156963 19 53198033 to 53198058 25 + TSS region transcription start site region 156963
Tssr159809 19 53199140 to 53199145 5 - TSS region transcription start site region 159809
1700001K23Rik 19 53248736 to 53255205 6469 - lncRNA gene RIKEN cDNA 1700001K23 gene
Tssr156964 19 53251249 to 53251285 36 + TSS region transcription start site region 156964
Tssr159810 19 53255185 to 53255196 11 - TSS region transcription start site region 159810
Gm36339 19 53265747 to 53266864 1117 + pseudogene predicted gene, 36339
Cpgi11055 19 53273988 to 53274407 419 CpG island CpG island 11055
Tssr159811 19 53283904 to 53283915 11 - TSS region transcription start site region 159811