Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 19:5274333-5375253

Filter by:
49 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sf3b2 19 5273932 to 5295455 21523 - protein coding gene splicing factor 3b, subunit 2
Tssr154393 19 5286803 to 5286822 19 + TSS region transcription start site region 154393
Tssr154394 19 5286880 to 5286924 44 + TSS region transcription start site region 154394
Tssr157565 19 5293188 to 5293198 10 - TSS region transcription start site region 157565
Tssr157566 19 5293275 to 5293289 14 - TSS region transcription start site region 157566
Cpgi10439 19 5295030 to 5295853 823 CpG island CpG island 10439
Gm50203 19 5295196 to 5296028 832 + lncRNA gene predicted gene, 50203
Tssr157567 19 5295397 to 5295430 33 - TSS region transcription start site region 157567
Tssr154395 19 5298276 to 5298287 11 + TSS region transcription start site region 154395
Tssr154396 19 5298302 to 5298357 55 + TSS region transcription start site region 154396
Cpgi10440 19 5298303 to 5298516 213 CpG island CpG island 10440
Gal3st3 19 5298331 to 5308738 10407 + protein coding gene galactose-3-O-sulfotransferase 3
Tssr154397 19 5298364 to 5298367 3 + TSS region transcription start site region 154397
Tssr157568 19 5302500 to 5302502 2 - TSS region transcription start site region 157568
Gm42064 19 5305873 to 5307103 1230 - lncRNA gene predicted gene, 42064
Cpgi10441 19 5306679 to 5308221 1542 CpG island CpG island 10441
Tssr157569 19 5307071 to 5307114 43 - TSS region transcription start site region 157569
Tssr157570 19 5307508 to 5307528 20 - TSS region transcription start site region 157570
Tssr154398 19 5308252 to 5308272 20 + TSS region transcription start site region 154398
Tssr154399 19 5308302 to 5308313 11 + TSS region transcription start site region 154399
Tssr154400 19 5308367 to 5308371 4 + TSS region transcription start site region 154400
Nstr1 19 5321112 to 5321310 198 QTL nerve sheath tumor resistance QTL 1
D19Mit59 19 5321112 to 5321310 198 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 59
Gm50208 19 5321606 to 5321798 192 + pseudogene predicted gene, 50208
Cpgi10442 19 5323944 to 5324095 151 CpG island CpG island 10442
Gm7074 19 5324333 to 5325253 920 + pseudogene predicted gene 7074
Tssr154401 19 5328000 to 5328017 17 + TSS region transcription start site region 154401
Tssr154402 19 5328049 to 5328061 12 + TSS region transcription start site region 154402
Tssr154403 19 5335619 to 5335630 11 + TSS region transcription start site region 154403
Tssr154404 19 5335644 to 5335651 7 + TSS region transcription start site region 154404
Catsper1 19 5335741 to 5344280 8539 + protein coding gene cation channel, sperm associated 1
Cst6 19 5344705 to 5349574 4869 - protein coding gene cystatin E/M
Cpgi10443 19 5349104 to 5349507 403 CpG island CpG island 10443
Tssr157571 19 5349340 to 5349358 18 - TSS region transcription start site region 157571
Banf1 19 5364633 to 5366876 2243 - protein coding gene BAF nuclear assembly factor 1
Tssr157572 19 5364802 to 5364825 23 - TSS region transcription start site region 157572
Tssr157573 19 5364859 to 5364878 19 - TSS region transcription start site region 157573
Tssr157574 19 5364893 to 5364918 25 - TSS region transcription start site region 157574
Cpgi10444 19 5365701 to 5367695 1994 CpG island CpG island 10444
Tssr157575 19 5366253 to 5366264 11 - TSS region transcription start site region 157575
Tssr157576 19 5366269 to 5366280 11 - TSS region transcription start site region 157576
Tssr157577 19 5366285 to 5366378 93 - TSS region transcription start site region 157577
Tssr154405 19 5366387 to 5366421 34 + TSS region transcription start site region 154405
Tssr157578 19 5366598 to 5366611 13 - TSS region transcription start site region 157578
Tssr157579 19 5366626 to 5366663 37 - TSS region transcription start site region 157579
Tssr154406 19 5366764 to 5366851 87 + TSS region transcription start site region 154406
Eif1ad 19 5366813 to 5371518 4705 + protein coding gene eukaryotic translation initiation factor 1A domain containing
Tssr154407 19 5366948 to 5366962 14 + TSS region transcription start site region 154407
Tssr154408 19 5366965 to 5367037 72 + TSS region transcription start site region 154408