Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:5110804-5300813

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Klc2 19 5107746 to 5118560 10814 - protein coding gene kinesin light chain 2
Tssr154392 19 5111320 to 5111334 14 + TSS region transcription start site region 154392
Cpgi10437 19 5117082 to 5118710 1628 CpG island CpG island 10437
Gm10817 19 5118037 to 5119299 1262 unclassified gene predicted gene 10817
Tssr157553 19 5118224 to 5118322 98 - TSS region transcription start site region 157553
Tssr157554 19 5118345 to 5118358 13 - TSS region transcription start site region 157554
Tssr157555 19 5118372 to 5118390 18 - TSS region transcription start site region 157555
Gm30840 19 5118844 to 5126127 7283 + lncRNA gene predicted gene, 30840
Gm5242 19 5131740 to 5132972 1232 - pseudogene predicted gene 5242
Pacs1 19 5133688 to 5273119 139431 - protein coding gene phosphofurin acidic cluster sorting protein 1
Tssr157556 19 5134361 to 5134366 5 - TSS region transcription start site region 157556
Tssr157557 19 5158599 to 5158603 4 - TSS region transcription start site region 157557
Gm27468 19 5201198 to 5201303 105 - miRNA gene predicted gene, 27468
Tssr157558 19 5205804 to 5205813 9 - TSS region transcription start site region 157558
D430030G11Rik 19 5212479 to 5215044 2565 unclassified non-coding RNA gene RIKEN cDNA D430030G11 gene
D19Dcr3 19 5222811 to 5222908 97 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 3
Cpgi10438 19 5272247 to 5273585 1338 CpG island CpG island 10438
Tssr157559 19 5272892 to 5272901 9 - TSS region transcription start site region 157559
Tssr157560 19 5272982 to 5273000 18 - TSS region transcription start site region 157560
Tssr157561 19 5273007 to 5273037 30 - TSS region transcription start site region 157561
Tssr157562 19 5273068 to 5273079 11 - TSS region transcription start site region 157562
Tssr157563 19 5273080 to 5273129 49 - TSS region transcription start site region 157563
Tssr157564 19 5273265 to 5273290 25 - TSS region transcription start site region 157564
Sf3b2 19 5273923 to 5295455 21532 - protein coding gene splicing factor 3b, subunit 2
Tssr154393 19 5286803 to 5286822 19 + TSS region transcription start site region 154393
Tssr154394 19 5286880 to 5286924 44 + TSS region transcription start site region 154394
Tssr157565 19 5293188 to 5293198 10 - TSS region transcription start site region 157565
Tssr157566 19 5293275 to 5293289 14 - TSS region transcription start site region 157566
Cpgi10439 19 5295030 to 5295853 823 CpG island CpG island 10439
Tssr157567 19 5295397 to 5295430 33 - TSS region transcription start site region 157567
Tssr154395 19 5298276 to 5298287 11 + TSS region transcription start site region 154395
Tssr154396 19 5298302 to 5298357 55 + TSS region transcription start site region 154396
Cpgi10440 19 5298303 to 5298516 213 CpG island CpG island 10440
Gal3st3 19 5298331 to 5308738 10407 + protein coding gene galactose-3-O-sulfotransferase 3
Tssr154397 19 5298364 to 5298367 3 + TSS region transcription start site region 154397