Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:5088844-5156127

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi10433 19 5087728 to 5089033 1305 CpG island CpG island 10433
Yif1a 19 5088538 to 5092879 4341 + protein coding gene Yip1 interacting factor homolog A (S. cerevisiae)
Cnih2 19 5092871 to 5098418 5547 - protein coding gene cornichon family AMPA receptor auxiliary protein 2
Tssr157544 19 5093003 to 5093016 13 - TSS region transcription start site region 157544
Tssr157545 19 5093248 to 5093266 18 - TSS region transcription start site region 157545
Cpgi10434 19 5094209 to 5094751 542 CpG island CpG island 10434
Tssr157546 19 5094597 to 5094624 27 - TSS region transcription start site region 157546
Cpgi10435 19 5097951 to 5099066 1115 CpG island CpG island 10435
Tssr157547 19 5098251 to 5098275 24 - TSS region transcription start site region 157547
Tssr157548 19 5098460 to 5098559 99 - TSS region transcription start site region 157548
Rab1b 19 5099207 to 5106996 7789 - protein coding gene RAB1B, member RAS oncogene family
Tssr157549 19 5099505 to 5099525 20 - TSS region transcription start site region 157549
Tssr157550 19 5099676 to 5099701 25 - TSS region transcription start site region 157550
Cpgi10436 19 5106570 to 5107226 656 CpG island CpG island 10436
Tssr157551 19 5106967 to 5107023 56 - TSS region transcription start site region 157551
Tssr157552 19 5107027 to 5107038 11 - TSS region transcription start site region 157552
Klc2 19 5107746 to 5118560 10814 - protein coding gene kinesin light chain 2
Tssr154392 19 5111320 to 5111334 14 + TSS region transcription start site region 154392
Cpgi10437 19 5117082 to 5118710 1628 CpG island CpG island 10437
Gm10817 19 5118037 to 5119299 1262 unclassified gene predicted gene 10817
Tssr157553 19 5118224 to 5118322 98 - TSS region transcription start site region 157553
Tssr157554 19 5118345 to 5118358 13 - TSS region transcription start site region 157554
Tssr157555 19 5118372 to 5118390 18 - TSS region transcription start site region 157555
Gm30840 19 5118844 to 5126127 7283 + lncRNA gene predicted gene, 30840
Gm5242 19 5131740 to 5132972 1232 - pseudogene predicted gene 5242
Pacs1 19 5133688 to 5273119 139431 - protein coding gene phosphofurin acidic cluster sorting protein 1
Tssr157556 19 5134361 to 5134366 5 - TSS region transcription start site region 157556