MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 19:47207402-47267497

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Neurl1a	19	47178820 to 47259440	80620	+	protein coding gene	neuralized E3 ubiquitin protein ligase 1A
Tssr156854	19	47228804 to 47228815	11	+	TSS region	transcription start site region 156854
Tssr5543	19	47228840 to 47228872	32	+	TSS region	transcription start site region 5543
Tssr156855	19	47229020 to 47229047	27	+	TSS region	transcription start site region 156855
Tssr156856	19	47229066 to 47229073	7	+	TSS region	transcription start site region 156856
D19Dcr91	19	47232819 to 47232922	103		DNA segment	DNA Segment, Chr 19, Derry C. Roopenian 91
D19Dcr92	19	47237402 to 47237497	95		DNA segment	DNA Segment, Chr 19, Derry C. Roopenian 92
D19Dcr93	19	47237783 to 47237878	95		DNA segment	DNA Segment, Chr 19, Derry C. Roopenian 93
Cpgi11023	19	47239776 to 47240033	257		CpG island	CpG island 11023
Tssr156857	19	47240324 to 47240349	25	+	TSS region	transcription start site region 156857
Cpgi11024	19	47240403 to 47240642	239		CpG island	CpG island 11024
D19Dcr94	19	47245984 to 47246090	106		DNA segment	DNA Segment, Chr 19, Derry C. Roopenian 94
Cpgi11025	19	47252886 to 47253898	1012		CpG island	CpG island 11025
Tssr156858	19	47253417 to 47253447	30	+	TSS region	transcription start site region 156858
Sh3pxd2a	19	47260174 to 47464411	204237	-	protein coding gene	SH3 and PX domains 2A
Tssr159709	19	47266121 to 47266130	9	-	TSS region	transcription start site region 159709
Tssr159710	19	47266880 to 47266886	6	-	TSS region	transcription start site region 159710
Cpgi11026	19	47267142 to 47267507	365		CpG island	CpG island 11026