Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:46792298-47072302

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cnnm2 19 46761564 to 46878580 117016 + protein coding gene cyclin M2
Tssr156814 19 46819495 to 46819538 43 + TSS region transcription start site region 156814
Tssr156815 19 46846848 to 46846860 12 + TSS region transcription start site region 156815
Tssr159667 19 46863537 to 46863550 13 - TSS region transcription start site region 159667
Tssr159668 19 46863556 to 46863569 13 - TSS region transcription start site region 159668
Tssr159669 19 46863640 to 46863653 13 - TSS region transcription start site region 159669
Tssr156816 19 46863885 to 46863894 9 + TSS region transcription start site region 156816
Tssr156817 19 46863903 to 46863922 19 + TSS region transcription start site region 156817
Tssr159670 19 46864233 to 46864280 47 - TSS region transcription start site region 159670
Tssr5541 19 46868971 to 46868993 22 - TSS region transcription start site region 5541
A930026I22Rik 19 46882356 to 46883973 1617 unclassified gene RIKEN cDNA A930026I22 gene
Nt5c2 19 46886831 to 47015153 128322 - protein coding gene 5'-nucleotidase, cytosolic II
Gm9751 19 46889007 to 46909574 20567 unclassified gene predicted gene 9751
Tssr159671 19 46901467 to 46901471 4 - TSS region transcription start site region 159671
Tssr159672 19 46908645 to 46908649 4 - TSS region transcription start site region 159672
Gm18490 19 46920507 to 46921270 763 - pseudogene predicted gene, 18490
Tssr159673 19 46925558 to 46925562 4 - TSS region transcription start site region 159673
Tssr159674 19 46929222 to 46929227 5 - TSS region transcription start site region 159674
Tssr159675 19 46932298 to 46932302 4 - TSS region transcription start site region 159675
Tssr159676 19 46941035 to 46941044 9 - TSS region transcription start site region 159676
Tssr159677 19 46943938 to 46943955 17 - TSS region transcription start site region 159677
Tssr159678 19 46946642 to 46946661 19 - TSS region transcription start site region 159678
Cpgi11013 19 46961542 to 46962659 1117 CpG island CpG island 11013
Tssr156818 19 46961808 to 46961820 12 + TSS region transcription start site region 156818
Tssr159679 19 46961876 to 46961895 19 - TSS region transcription start site region 159679
Tssr159680 19 46961916 to 46961930 14 - TSS region transcription start site region 159680
Tssr159681 19 46961936 to 46961972 36 - TSS region transcription start site region 159681
Tssr159682 19 46962301 to 46962317 16 - TSS region transcription start site region 159682
Tssr159683 19 46962325 to 46962333 8 - TSS region transcription start site region 159683
Tssr159684 19 46962509 to 46962579 70 - TSS region transcription start site region 159684
Tssr156819 19 46962658 to 46962699 41 + TSS region transcription start site region 156819
Tssr159685 19 46969540 to 46969555 15 - TSS region transcription start site region 159685
Tssr159686 19 46969562 to 46969572 10 - TSS region transcription start site region 159686
D19Dcr36 19 46970236 to 46970333 97 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 36
Tssr159687 19 46985363 to 46985368 5 - TSS region transcription start site region 159687
Tssr159688 19 46985372 to 46985398 26 - TSS region transcription start site region 159688
Tssr156820 19 46985518 to 46985532 14 + TSS region transcription start site region 156820
Tssr159689 19 46987809 to 46987820 11 - TSS region transcription start site region 159689
Tssr156821 19 46987925 to 46987956 31 + TSS region transcription start site region 156821
Gm18657 19 46996290 to 46997196 906 + pseudogene predicted gene, 18657
Cpgi11014 19 47014041 to 47016016 1975 CpG island CpG island 11014
Tssr156822 19 47014477 to 47014486 9 + TSS region transcription start site region 156822
Tssr156823 19 47014660 to 47014671 11 + TSS region transcription start site region 156823
Tssr156824 19 47014672 to 47014691 19 + TSS region transcription start site region 156824
Ina 19 47014698 to 47024358 9660 + protein coding gene internexin neuronal intermediate filament protein, alpha
Tssr159690 19 47015113 to 47015206 93 - TSS region transcription start site region 159690
Tssr156825 19 47015204 to 47015216 12 + TSS region transcription start site region 156825
Tssr156826 19 47015219 to 47015289 70 + TSS region transcription start site region 156826
Tssr156827 19 47015299 to 47015314 15 + TSS region transcription start site region 156827
Tssr156828 19 47015317 to 47015335 18 + TSS region transcription start site region 156828
Cpgi11015 19 47016479 to 47016757 278 CpG island CpG island 11015
Tssr156829 19 47016826 to 47016829 3 + TSS region transcription start site region 156829
Tssr5542 19 47023371 to 47023382 11 + TSS region transcription start site region 5542
Tssr156830 19 47023387 to 47023400 13 + TSS region transcription start site region 156830
Tssr156831 19 47023444 to 47023460 16 + TSS region transcription start site region 156831
Tssr156832 19 47023500 to 47023513 13 + TSS region transcription start site region 156832
Tssr156833 19 47023545 to 47023556 11 + TSS region transcription start site region 156833
Tssr156834 19 47023571 to 47023582 11 + TSS region transcription start site region 156834
Tssr156835 19 47023809 to 47023820 11 + TSS region transcription start site region 156835
Tssr156836 19 47023837 to 47023848 11 + TSS region transcription start site region 156836
Tssr156837 19 47023924 to 47023934 10 + TSS region transcription start site region 156837
Tssr156838 19 47024048 to 47024059 11 + TSS region transcription start site region 156838
Tssr156839 19 47024651 to 47024663 12 + TSS region transcription start site region 156839
Tssr156840 19 47024727 to 47024738 11 + TSS region transcription start site region 156840
Tssr156841 19 47024758 to 47024776 18 + TSS region transcription start site region 156841
Tssr156842 19 47024978 to 47024986 8 + TSS region transcription start site region 156842
Tssr156843 19 47025253 to 47025269 16 + TSS region transcription start site region 156843
Pcgf6 19 47033619 to 47050845 17226 - protein coding gene polycomb group ring finger 6
Cpgi11016 19 47050240 to 47051125 885 CpG island CpG island 11016
Tssr159691 19 47050326 to 47050374 48 - TSS region transcription start site region 159691
Tssr159692 19 47050823 to 47050915 92 - TSS region transcription start site region 159692
Gm23140 19 47058162 to 47058268 106 + snRNA gene predicted gene, 23140
Cpgi11017 19 47067489 to 47068684 1195 CpG island CpG island 11017
Tssr156844 19 47067721 to 47067768 47 + TSS region transcription start site region 156844
Taf5 19 47067748 to 47083479 15731 + protein coding gene TATA-box binding protein associated factor 5
Tssr159693 19 47068378 to 47068402 24 - TSS region transcription start site region 159693
Tssr159694 19 47068412 to 47068423 11 - TSS region transcription start site region 159694